RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 RTN3O95197 1032 aaPredicted RBP18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 RARGP13631 454 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 CYP2F1P24903 491 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 CXCL17Q6UXB2 119 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 UBE2OQ9C0C9 1292 aaKnown RBP18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 YY1AP1Q9H869 796 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 COG4Q9H9E3 785 aa18.5■□□□□ 0.55
CLSTN1-202ENST00000377298 TIMM44O43615 452 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 JCHAINP01591 159 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 LRRC8EQ6NSJ5 796 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 WDR93Q6P2C0 686 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 E2F7Q96AV8 911 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 CCT8L2Q96SF2 557 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SPATA16Q9BXB7 569 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 HIC1Q14526 733 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SNX31Q8N9S9 440 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SERPINB11Q96P15 392 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 FAF1Q9UNN5 650 aaPredicted RBP18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 H2AFXP16104 143 aaPredicted RBP18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 TUFMP49411 452 aaKnown RBP18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 ACAP1Q15027 740 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 PDCD2Q16342 344 aaPredicted RBP18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 AGAP9Q5VTM2 703 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 FBXO36Q8NEA4 188 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 WNK4Q96J92 1243 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 PDGFCQ9NRA1 345 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 RIC8BQ9NVN3 520 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 IPPQ9Y573 584 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 LRRC10BA6NIK2 292 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 KLHL2O95198 593 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SMIM10L2AP0DMW4 78 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SMIM10L2BP0DMW5 78 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 TBX4P57082 545 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 UNC93AQ86WB7 457 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 TRIML2Q8N7C3 387 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 ACTL9Q8TC94 416 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 SLC2A14Q8TDB8 520 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 CLCA2Q9UQC9 943 aa18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 MTO1Q9Y2Z2 717 aaKnown RBP18.49■□□□□ 0.55
CLSTN1-202ENST00000377298 EIF3HO15372 352 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 SERPIND1P05546 499 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 IL10P22301 178 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 YWHAQP27348 245 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 PLA2G4AP47712 749 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 RHOAP61586 193 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 ACTN3Q08043 901 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 GAD1Q99259 594 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 TOMM70O94826 608 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 ITGB5P18084 799 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CDH8P55286 799 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 NFIL3Q16649 462 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 TMEM161BQ8NDZ6 487 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 TMEM121Q9BTD3 319 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 APOL5Q9BWW9 433 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 BRD8Q9H0E9 1235 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 ING2Q9H160 280 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CDYLQ9Y232 598 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 SNCAIPQ9Y6H5 919 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 MEFVO15553 781 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 RNASEH1O60930 286 aaKnown RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CBWD6Q4V339 395 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CBWD3Q5JTY5 395 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CBWD5Q5RIA9 395 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 ST13P4Q8IZP2 240 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 FAM167BQ9BTA0 163 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 MRPL1Q9BYD6 325 aaKnown RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 MARCOQ9UEW3 520 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 NFAT5O94916 1531 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 CRTAMO95727 393 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 KRT16P08779 473 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 MYL4P12829 197 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 PGM1P36871 562 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 C6orf10Q5SRN2 563 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 EDEM1Q92611 657 aa18.48■□□□□ 0.55
CLSTN1-202ENST00000377298 RTP1P59025 263 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 AMPD2Q01433 879 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 KDSRQ06136 332 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 IKBKEQ14164 716 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 DNAL1Q4LDG9 190 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 MOB2Q70IA6 237 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 ETNPPLQ8TBG4 499 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 ZNF473Q8WTR7 871 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 RIN2Q8WYP3 895 aaPredicted RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 PPP1R36Q96LQ0 422 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 HSD17B14Q9BPX1 270 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 CLASP2O75122 1294 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 GLRA3O75311 464 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 SRP72O76094 671 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 SLC6A3Q01959 620 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 RETSATQ6NUM9 610 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 LZTR1Q8N653 840 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 PCYOX1LQ8NBM8 494 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 IL31RAQ8NI17 732 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 TEKT4Q8WW24 435 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 DNAJC19Q96DA6 116 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 SENP8Q96LD8 212 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 ADGRE3Q9BY15 652 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 MANSC1Q9H8J5 431 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms