RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.21
ACTN1-202ENST00000376839 ANK1P16157 1881 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ZBTB42B2RXF5 422 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 CYB561D2O14569 222 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 CHADO15335 359 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 KCNN4O15554 427 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 MAP3K13O43283 966 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 TBX10O75333 385 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 GRAP2O75791 330 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ENDOD1O94919 500 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 VHLP40337 213 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 MRPS5P82675 430 aaKnown RBP13.76□□□□□ -0.21
ACTN1-202ENST00000376839 LY6KQ17RY6 165 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ATF7IP2Q5U623 682 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 UCMAQ8WVF2 138 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 TRAPPC12Q8WVT3 735 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 INO80B-WBP1J3KQ70 363 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 PSMG1O95456 288 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 RXRBP28702 533 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 GPD2P43304 727 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 BST1Q10588 318 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-202ENST00000376839 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 CAND1Q86VP6 1230 aaKnown RBP13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ARMC2Q8NEN0 867 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 SLC13A1Q9BZW2 595 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-202ENST00000376839 IQCGQ9H095 443 aaKnown RBP13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ASNSD1Q9NWL6 643 aa13.76□□□□□ -0.21
ACTN1-202ENST00000376839 ITGB3P05106 788 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 RBL1P28749 1068 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 GABRB2P47870 512 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 ZNF143P52747 638 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SEPT1Q8WYJ6 367 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 CDT1Q9H211 546 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 MINDY3Q9H8M7 445 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 MARCOQ9UEW3 520 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 ZC3H7BQ9UGR2 993 aaKnown RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 PLLPQ9Y342 182 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 HEY1Q9Y5J3 304 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 KLF11O14901 512 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 CILPO75339 1184 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SPAG6O75602 509 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 IL1BP01584 269 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 CYP3A5P20815 502 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 AMPD1P23109 780 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 MRPS35P82673 323 aaKnown RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 KLC1Q07866 573 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 TMEM176AQ96HP8 235 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 RNF157Q96PX1 679 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 PNPLA8Q9NP80 782 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■□□□□ 10.1
ACTN1-202ENST00000376839 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.75□□□□□ -0.21
ACTN1-202ENST00000376839 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 C2CD4BA6NLJ0 364 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 ENO4A6NNW6 628 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 C19orf81C9J6K1 198 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 H3BRJ5 948 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 RFPL1O75677 317 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 TOP3BO95985 862 aaKnown RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 HMGCRP04035 888 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 APRTP07741 180 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 SNRPAP09012 282 aaKnown RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 CSH1P0DML2 217 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 CSH2P0DML3 217 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 KITP10721 976 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 GPD1P21695 349 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 IL4RP24394 825 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 ERFP50548 548 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 TMPRSS15P98073 1019 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 THOC5Q13769 683 aaKnown RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 LRRC74BQ6ZQY2 392 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-202ENST00000376839 CNPY3Q9BT09 278 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 STK32BQ9NY57 414 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 PAK5Q9P286 719 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 CAPN14A8MX76 684 aa13.74□□□□□ -0.21
ACTN1-202ENST00000376839 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms