RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RHOBTB1O94844 696 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 KAT7O95251 611 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 ZDHHC11BP0C7U3 371 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 ZNF806P0C7X5 589 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 PSMC2P35998 433 aaKnown RBP22.25■■□□□ 1.15
VSX1-201ENST00000376707 NUCB2P80303 420 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 MRPS21P82921 87 aaKnown RBP22.25■■□□□ 1.15
VSX1-201ENST00000376707 ADAM9Q13443 819 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 LY6G5CQ5SRR4 150 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 CCDC150Q8NCX0 1101 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 TAS1R2Q8TE23 839 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 CCDC34Q96HJ3 373 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 NT5C1AQ9BXI3 368 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 DUSP15Q9H1R2 295 aaPredicted RBP22.25■■□□□ 1.15
VSX1-201ENST00000376707 CYP3A43Q9HB55 503 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 ARHGEF4Q9NR80 690 aa22.25■■□□□ 1.15
VSX1-201ENST00000376707 TLR8Q9NR97 1041 aaKnown RBP22.25■■□□□ 1.15
VSX1-201ENST00000376707 DCLK1O15075 740 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 TLR5O60602 858 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 IRF1P10914 325 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 GBP1P32455 592 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 MPLP40238 635 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 GAD2Q05329 585 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 KDSRQ06136 332 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 ENPEPQ07075 957 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 PPP3CAQ08209 521 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 INCA1Q0VD86 236 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 USP39Q53GS9 565 aaKnown RBP22.24■■□□□ 1.15
VSX1-201ENST00000376707 BTBD8Q5XKL5 378 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 ANO7Q6IWH7 933 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 C12orf40Q86WS4 652 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 JAKMIP2Q96AA8 810 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 TWNKQ96RR1 684 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 HNRNPABQ99729 332 aaKnown RBP22.24■■□□□ 1.15
VSX1-201ENST00000376707 TPSD1Q9BZJ3 242 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 DNAI2Q9GZS0 605 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 NIF3L1Q9GZT8 377 aa22.24■■□□□ 1.15
VSX1-201ENST00000376707 ANTXRLA6NF34 631 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 CD58P19256 250 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 GRIA2P42262 883 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 MCCD1P59942 119 aaPredicted RBP22.23■■□□□ 1.15
VSX1-201ENST00000376707 MESP2Q0VG99 397 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 CRY1Q16526 586 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 ZCWPW2Q504Y3 356 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 IL31Q6EBC2 164 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 TTC30AQ86WT1 665 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 SFTPA1Q8IWL2 248 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 BBS7Q8IWZ6 715 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 FMR1NBQ8N0W7 255 aaPredicted RBP22.23■■□□□ 1.15
VSX1-201ENST00000376707 ALLCQ8N6M5 410 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 CYFIP2Q96F07 1278 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 APOBEC3GQ9HC16 384 aaKnown RBP22.23■■□□□ 1.15
VSX1-201ENST00000376707 TMEM8AQ9HCN3 771 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 VPS45Q9NRW7 570 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 INVSQ9Y283 1065 aa22.23■■□□□ 1.15
VSX1-201ENST00000376707 NCOR2Q9Y618 2525 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 KLF8O95600 359 aaPredicted RBP22.22■■□□□ 1.15
VSX1-201ENST00000376707 TIE1P35590 1138 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 HSF5Q4G112 596 aaPredicted RBP22.22■■□□□ 1.15
VSX1-201ENST00000376707 PPM1JQ5JR12 505 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 PLA2G2CQ5R387 149 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 CLEC20AQ6ZU45 233 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 C11orf74Q86VG3 221 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 RASSF3Q86WH2 238 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 TXNDC5Q8NBS9 432 aaKnown RBP22.22■■□□□ 1.15
VSX1-201ENST00000376707 CNOT6LQ96LI5 555 aaKnown RBP22.22■■□□□ 1.15
VSX1-201ENST00000376707 DUSP9Q99956 384 aaKnown RBP22.22■■□□□ 1.15
VSX1-201ENST00000376707 SMOC1Q9H4F8 434 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 SPHK2Q9NRA0 654 aa22.22■■□□□ 1.15
VSX1-201ENST00000376707 HOXC11O43248 304 aaPredicted RBP22.21■■□□□ 1.15
VSX1-201ENST00000376707 ALDH1A2O94788 518 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 ACO1P21399 889 aaKnown RBP22.21■■□□□ 1.15
VSX1-201ENST00000376707 TNFRSF4P43489 277 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 PGFP49763 221 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 CREB5Q02930 508 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 ANO4Q32M45 955 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 PREPLQ4J6C6 727 aaPredicted RBP22.21■■□□□ 1.15
VSX1-201ENST00000376707 KRT39Q6A163 491 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 GPRIN1Q7Z2K8 1008 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 NAT16Q8N8M0 369 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 IL17RCQ8NAC3 791 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 DDX1Q92499 740 aaKnown RBP22.21■■□□□ 1.15
VSX1-201ENST00000376707 PNPLA8Q9NP80 782 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 SCML2Q9UQR0 700 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 PCDHA5Q9Y5H7 936 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 KIAA1549LQ6ZVL6 1849 aa22.21■■□□□ 1.15
VSX1-201ENST00000376707 MYO16Q9Y6X6 1858 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 A0A0A0MRY4 1105 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 TBC1D3BA6NDS4 549 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 CYP26A1O43174 497 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 CILPO75339 1184 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 TBX18O95935 607 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 KCNA4P22459 653 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 GTF2H1P32780 548 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 ATP5C1P36542 298 aaKnown RBP22.2■■□□□ 1.14
VSX1-201ENST00000376707 KIR2DL1P43626 348 aaPredicted RBP22.2■■□□□ 1.14
VSX1-201ENST00000376707 LIMK1P53667 647 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 GOLGA8FQ08AF8 430 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 GOLGA8DPQ0D2H9 430 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 EDRF1Q3B7T1 1238 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms