RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ABI1Q8IZP0 508 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 DEFB106AQ8N104 65 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 TTC13Q8NBP0 860 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 RIN2Q8WYP3 895 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 PIK3R5Q8WYR1 880 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 ART4Q93070 314 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 NKD2Q969F2 451 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 ZIM3Q96PE6 472 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 TMEM209Q96SK2 561 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 SNRNP25Q9BV90 132 aaKnown RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 RHOBTB2Q9BYZ6 727 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 FAM129AQ9BZQ8 928 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 CSNK1G1Q9HCP0 422 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 TMLHEQ9NVH6 421 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 SAE1Q9UBE0 346 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 ZNF148Q9UQR1 794 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 DRG1Q9Y295 367 aaKnown RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 TANC1Q9C0D5 1861 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 MDM4O15151 490 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 DAB1O75553 588 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 FBXO21O94952 628 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 HSD17B3P37058 310 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 ATXN1P54253 815 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 DHX9Q08211 1270 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 CALCOCO2Q13137 446 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 MMRN1Q13201 1228 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 PDK2Q15119 407 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 OASLQ15646 514 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 TCTN1Q2MV58 587 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 ZC3H12AQ5D1E8 599 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 FAM43BQ6ZT52 329 aaPredicted RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 STRADAQ7RTN6 431 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 GSTA5Q7RTV2 222 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 GPRIN1Q7Z2K8 1008 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 LRRTM3Q86VH5 581 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 SLC35B2Q8TB61 432 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 FAM71BQ8TC56 605 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 ACTL9Q8TC94 416 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 SCLYQ96I15 445 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 ULBP1Q9BZM6 244 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 HIPK3Q9H422 1215 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 GPATCH2LQ9NWQ4 482 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 WBP1LQ9NX94 342 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 HHLA1C9JL84 531 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 BDNFP23560 247 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 OTUD4Q01804 1114 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 KRT81Q14533 505 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 MAPRE1Q15691 268 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 UAP1Q16222 522 aaPredicted RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 SLC25A52Q3SY17 297 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 MAP7D3Q8IWC1 876 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 CCDC89Q8N998 374 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 SNF8Q96H20 258 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 FRMD8P1Q9BZ68 369 aaPredicted RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 TXLNGYQ9BZA5 131 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 CNGB3Q9NQW8 809 aa18.46■□□□□ 0.55
CTTN-203ENST00000376561 MTRF1LQ9UGC7 380 aaKnown RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.55
CTTN-203ENST00000376561 TTC3P53804 2025 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 NRP1O14786 923 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 POLR3GO15318 223 aaPredicted RBP18.45■□□□□ 0.54
CTTN-203ENST00000376561 TP73O15350 636 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 PPFIA2O75334 1257 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ITIH2P19823 946 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 KLRC2P26717 231 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 NOS2P35228 1153 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 DAOAP59103 153 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 TSPY1Q01534 308 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 DCAF6Q58WW2 860 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ERMARDQ5T6L9 678 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ALLCQ8N6M5 410 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 RUFY1Q96T51 708 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 MAK16Q9BXY0 300 aaKnown RBP18.45■□□□□ 0.54
CTTN-203ENST00000376561 CALCOCO1Q9P1Z2 691 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 NLRC5Q86WI3 1866 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 APOC4-APOC2K7ER74 178 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 KRT14P02533 472 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 APOC2P02655 101 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ITGAVP06756 1048 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ATF2P15336 505 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ADCY8P40145 1251 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 VPS41P49754 854 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 CCL23P55773 120 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 FAAP100Q0VG06 881 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 MTMR3Q13615 1198 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 CA9Q16790 459 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 HFE2Q6ZVN8 426 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 NT5C3BQ969T7 300 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 CASD1Q96PB1 797 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 SLC2A13Q96QE2 648 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 POPDC2Q9HBU9 364 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 PCDH18Q9HCL0 1135 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 ATP8A1Q9Y2Q0 1164 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 PTPRDP23468 1912 aa18.45■□□□□ 0.54
CTTN-203ENST00000376561 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
CTTN-203ENST00000376561 IL4RP24394 825 aa18.44■□□□□ 0.54
CTTN-203ENST00000376561 SULT1E1P49888 294 aa18.44■□□□□ 0.54
CTTN-203ENST00000376561 GATMP50440 423 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms