RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 SUPT3HB4E1H0 165 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 SUPT3HO75486 399 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 MTM1Q13496 603 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 FAXCQ5TGI0 409 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 CTU1Q7Z7A3 348 aaKnown RBP13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 UNC93AQ86WB7 457 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 ZSWIM1Q9BR11 485 aa13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 TRIM45Q9H8W5 580 aaPredicted RBP13.52□□□□□ -0.24
CACNA1F-202ENST00000376251 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 STIP1P31948 543 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 RENBPP51606 427 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 ZNF268Q14587 947 aaPredicted RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 PHLDB3Q6NSJ2 640 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 CELF6Q96J87 481 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 VPS9D1Q9Y2B5 631 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 SPAG7O75391 227 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 STAT4Q14765 748 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 SKA1Q96BD8 255 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 LTFP02788 710 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 ARF4P18085 180 aaPredicted RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 MDM2Q00987 491 aaPredicted RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 SPATS2Q86XZ4 545 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 SUSD6Q92537 303 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 TRMT13Q9NUP7 481 aaKnown RBP13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
CACNA1F-202ENST00000376251 BRAFP15056 766 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 KCNJ1P48048 391 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 GLUD2P49448 558 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 CLCN6P51797 869 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 TTPALQ9BTX7 342 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 MLXIPLQ9NP71 852 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 PCDHGB4Q9UN71 923 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 JCHAINP01591 159 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 CLEC4DQ8WXI8 215 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 MYLPFQ96A32 169 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 DNMT3LQ9UJW3 386 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 RWDD3Q9Y3V2 267 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 ALDH1A2O94788 518 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 CYP2F1P24903 491 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 SPRP35270 261 aaPredicted RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 SLC6A3Q01959 620 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 FSCBQ5H9T9 825 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 SPDYAQ5MJ70 313 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 AGR3Q8TD06 166 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 C2CD2Q9Y426 696 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 SMAPO00193 183 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 DIAPH2O60879 1101 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 CCNE2O96020 404 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 ACRP10323 421 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 MAP2K2P36507 400 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 UGT3A1Q6NUS8 523 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 FRMD8P1Q9BZ68 369 aaPredicted RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 TRIM33Q9UPN9 1127 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 MRFAP1Q9Y605 127 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 CASP5P51878 434 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 AARS2Q5JTZ9 985 aaKnown RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 EEF1DP3Q658K8 133 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 ZNF571Q7Z3V5 609 aaPredicted RBP13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 SLC35C1Q96A29 364 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 DNAJC7Q99615 494 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 L3MBTL1Q9Y468 752 aa13.51□□□□□ -0.25
CACNA1F-202ENST00000376251 GOLGA8RI6L899 631 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 LGR5O75473 907 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ICAM3P32942 547 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 DLG4P78352 724 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 MARC1Q5VT66 337 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 FAM47EQ6ZV65 393 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 LMNTD2Q8IXW0 634 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 TUBB6Q9BUF5 446 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 TASP1Q9H6P5 420 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SLC39A10Q9ULF5 831 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 PROSCO94903 275 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 OR1D2P34982 312 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SERPINB9P50453 376 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms