RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TMEM105Q8N8V8 129 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 TTC16Q8NEE8 873 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 ZNF606Q8WXB4 792 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 IRF7Q92985 503 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 CHFRQ96EP1 664 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 DDX23Q9BUQ8 820 aaKnown RBP16.82■□□□□ 0.28
C11orf88-202ENST00000375618 KIF9Q9HAQ2 790 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 PLCB1Q9NQ66 1216 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 TRPV5Q9NQA5 729 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 GTSE1Q9NYZ3 720 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 CYTH4Q9UIA0 394 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 MTF2Q9Y483 593 aaPredicted RBP16.82■□□□□ 0.28
C11orf88-202ENST00000375618 WNT6Q9Y6F9 365 aa16.82■□□□□ 0.28
C11orf88-202ENST00000375618 LEFTY2O00292 366 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TEX33O43247 280 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 THAP12O43422 761 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TLR5O60602 858 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 SETSIPP0DME0 302 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TCF3P15923 654 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 GNA15P30679 374 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 GPD2P43304 727 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TUBP50607 506 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 RAPGEF1Q13905 1077 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 SYCP1Q15431 976 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 SKOR2Q2VWA4 1001 aaPredicted RBP16.81■□□□□ 0.28
C11orf88-202ENST00000375618 ARHGAP29Q52LW3 1261 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 PM20D1Q6GTS8 502 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TPRG1Q6ZUI0 275 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 LUZP1Q86V48 1076 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 SLC47A2Q86VL8 602 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 KCTD13Q8WZ19 329 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 FAM81BQ96LP2 452 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 CYLDQ9NQC7 956 aa16.81■□□□□ 0.28
C11orf88-202ENST00000375618 TLR8Q9NR97 1041 aaKnown RBP16.81■□□□□ 0.28
C11orf88-202ENST00000375618 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.81■□□□□ 0.28
C11orf88-202ENST00000375618 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
C11orf88-202ENST00000375618 RARGP13631 454 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 CDK11BP21127 795 aaKnown RBP16.8■□□□□ 0.28
C11orf88-202ENST00000375618 AVPR2P30518 371 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 ASTLQ6HA08 431 aaPredicted RBP16.8■□□□□ 0.28
C11orf88-202ENST00000375618 TXNDC11Q6PKC3 985 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 ZNF687Q8N1G0 1237 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 WDTC1Q8N5D0 677 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 CLEC4CQ8WTT0 213 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 LINC00597Q9H2U6 94 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 MFSD1Q9H3U5 465 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 EBF3Q9H4W6 596 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 FAM207AQ9NSI2 230 aaPredicted RBP16.8■□□□□ 0.28
C11orf88-202ENST00000375618 CFAP97Q9P2B7 532 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 TJP2Q9UDY2 1190 aa16.8■□□□□ 0.28
C11orf88-202ENST00000375618 SMTNL1A8MU46 457 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 F8VZ95 297 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 GREM1O60565 184 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 ZBED1O96006 694 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 LCP1P13796 627 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 GLULP15104 373 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 RPL34P49207 117 aaKnown RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 PDE6CP51160 858 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 UBXN1Q04323 297 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 PRKCQQ04759 706 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 STILQ15468 1287 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 FKBP15Q5T1M5 1219 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 ERGIC2Q96RQ1 377 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 LRRC4Q9HBW1 653 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 THG1LQ9NWX6 298 aaKnown RBP16.79■□□□□ 0.28
C11orf88-202ENST00000375618 NAGPAQ9UK23 515 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 PIAS3Q9Y6X2 628 aa16.79■□□□□ 0.28
C11orf88-202ENST00000375618 YJEFN3A6XGL0 299 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 E7ENQ6 273 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 AOC1P19801 751 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 JAM2P57087 298 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 SLC8A3P57103 927 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 DAOAP59103 153 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 POLR2FP61218 127 aaKnown RBP16.78■□□□□ 0.28
C11orf88-202ENST00000375618 YWHAGP61981 247 aaKnown RBP eCLIP16.78■□□□□ 0.28
C11orf88-202ENST00000375618 FZD5Q13467 585 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 EML3Q32P44 896 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 PASD1Q8IV76 773 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 SUGP1Q8IWZ8 645 aaKnown RBP16.78■□□□□ 0.28
C11orf88-202ENST00000375618 CCDC105Q8IYK2 499 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 PJA1Q8NG27 643 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 OSCP1Q8WVF1 389 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 LTB4R2Q9NPC1 389 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 NLRC4Q9NPP4 1024 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
C11orf88-202ENST00000375618 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
C11orf88-202ENST00000375618 DLGAP2Q9P1A6 1054 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 ZNF318Q5VUA4 2279 aa16.78■□□□□ 0.28
C11orf88-202ENST00000375618 KANSL1LA0AUZ9 987 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 FAM170AA1A519 330 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 DCNP07585 359 aaKnown RBP16.77■□□□□ 0.28
C11orf88-202ENST00000375618 TPM2P07951 284 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 IRF1P10914 325 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms