RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PPCSQ9HAB8 311 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 SSU72Q9NP77 194 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 LZTS1Q9Y250 596 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 LRRIQ4A6NIV6 560 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 NR3C1P04150 777 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 ENO1P06733 434 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 CYP2B6P20813 491 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 CLCN2P51788 898 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 LPCAT4Q643R3 524 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 BORAQ6PGQ7 559 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 PACS1Q6VY07 963 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 ATP6V0A1Q93050 837 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 TRPV5Q9NQA5 729 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 MAP3K20Q9NYL2 800 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 NEU2Q9Y3R4 380 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 FSCN2O14926 492 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 CLDN3O15551 220 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ALDH2P05091 517 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 PLS3P13797 630 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ADRA1DP25100 572 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 RELAQ04206 551 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 FOLH1Q04609 750 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 MYLK3Q32MK0 819 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 SEZ6Q53EL9 994 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 HAUS6Q7Z4H7 955 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 BSNDQ8WZ55 320 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 CLPTM1LQ96KA5 538 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 RBM15Q96T37 977 aaKnown RBP eCLIP12.63□□□□□ -0.39
C9orf3-203ENST00000375315 VPS11Q9H270 941 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 MCM3APO60318 1980 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 SLC25A27O95847 323 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-203ENST00000375315 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ARMCX2Q7L311 632 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 TTC7BQ86TV6 843 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 SLC25A41Q8N5S1 370 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 SLC35C1Q96A29 364 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 CBWD1Q9BRT8 395 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 MRPL1Q9BYD6 325 aaKnown RBP12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
C9orf3-203ENST00000375315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SLC16A3O15427 465 aaKnown RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 FTLP02792 175 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 GCAP28676 217 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 PCSK6P29122 969 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SLC5A2P31639 672 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ARL4CP56559 192 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 NAA20P61599 178 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 TRIP10Q15642 601 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 IZUMO3Q5VZ72 239 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 MARVELD2Q8N4S9 558 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 METTL25Q8N6Q8 603 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CD101Q93033 1021 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 NMUR2Q9GZQ4 415 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 UTP6Q9NYH9 597 aaKnown RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 PLA2G4CQ9UP65 541 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 TGFB1I1O43294 461 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 TNFAIP8O95379 198 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 MYL2P10916 166 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ATP6V1B1P15313 513 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 KRT4P19013 534 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 PEX2P28328 305 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SFNP31947 248 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CCR3P51677 355 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 STAT5BP51692 787 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 DNERQ8NFT8 737 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 PYDC1Q8WXC3 89 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 KMT5AQ9NQR1 393 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 PSMC3IPQ9P2W1 217 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CROTQ9UKG9 612 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 DENND3A2RUS2 1198 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 TM9SF1O15321 606 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 LRRN2O75325 713 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 RRM1P23921 792 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms