RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 NCOR1O75376 2440 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SHISA3A0PJX4 238 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TMEM82A0PJX8 343 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF891A8MT65 544 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 NOP56O00567 594 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HNRNPDLO14979 420 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 RNMTO43148 476 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 NOL3O60936 208 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SRGAP2O75044 1071 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 LRP3O75074 770 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HTR3BO95264 441 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SLC4A1P02730 911 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 POLBP06746 335 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ITGAVP06756 1048 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ADRB2P07550 413 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PFKMP08237 780 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SRGAP2CP0DJJ0 459 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ACRP10323 421 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 KCNA5P22460 613 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SP100P23497 879 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 IL4RP24394 825 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PSMA4P25789 261 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 GCLCP48506 637 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ALDH9A1P49189 494 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CLCN5P51795 746 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 EPHB4P54760 987 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 POLE2P56282 527 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PHC1P78364 1004 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 NKX3-2P78367 333 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ACVR2BQ13705 512 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SEMA3AQ14563 771 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PLS1Q14651 629 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SMAD2Q15796 467 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ARHGAP44Q17R89 818 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 UTP14CQ5TAP6 766 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TANGO2Q6ICL3 276 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 MFSD5Q6N075 450 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF530Q6P9A1 599 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CNKSR3Q6P9H4 555 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF790Q6PG37 636 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 USP45Q70EL2 814 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 MAML2Q8IZL2 1156 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CAMKK1Q8N5S9 505 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 NAT8LQ8N9F0 302 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SPC24Q8NBT2 197 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF540Q8NDQ6 660 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SIMC1Q8NDZ2 872 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 XAGE3Q8WTP9 111 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HTRA1Q92743 480 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TEKT1Q969V4 418 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 MAELQ96JY0 434 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 KREMEN1Q96MU8 473 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF830Q96NB3 372 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ACAP3Q96P50 834 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZFYVE21Q9BQ24 234 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 B3GNT5Q9BYG0 378 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SENP6Q9GZR1 1112 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 DEFB129Q9H1M3 183 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TCF7L2Q9NQB0 619 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PAPOLBQ9NRJ5 636 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TOMM22Q9NS69 142 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TBCCD1Q9NVR7 557 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CHCHD3Q9NX63 227 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 GRHPRQ9UBQ7 328 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 UBA2Q9UBT2 640 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SUSD2Q9UGT4 822 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 LAMP5Q9UJQ1 280 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CFAP45Q9UL16 551 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CAB39Q9Y376 341 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PRUNE2Q8WUY3 3088 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZFHX2Q9C0A1 2572 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ATRXP46100 2492 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HNRNPCL2B2RXH8 293 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 AKR1B15C9JRZ8 316 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 H0YC42 278 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 DDX39AO00148 427 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 FFAR3O14843 346 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ASAP2O43150 1006 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CCP110O43303 1012 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ZBTB14O43829 449 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PLA2G6O60733 806 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HNRNPCL1O60812 293 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 ENDOD1O94919 500 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CSPG5O95196 566 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 RTN3O95197 1032 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 SNX4O95219 450 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TGDSO95455 350 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 TIMP1P01033 207 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 LMNAP02545 664 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 CLTBP09497 229 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HOXC6P09630 235 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 MYF5P13349 255 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 FERP16591 822 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PAMP19021 973 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 EEF1DP29692 281 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 PDIA3P30101 505 aaKnown RBP2.47□□□□□ -2.01
CCDC7-204ENST00000375025 LSP1P33241 339 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HOXD13P35453 343 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 RGS2P41220 211 aa2.47□□□□□ -2.01
CCDC7-204ENST00000375025 HSPA7P48741 367 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms