RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 KIF26AQ9ULI4 1882 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CHURC1-FNTBB4DL54 471 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KIF2AO00139 706 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DDX3XO00571 662 aaKnown RBP eCLIP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MICAL2O94851 1124 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CPB1P15086 417 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CYP11B1P15538 503 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CD58P19256 250 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RPL9P32969 192 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ASPAP45381 313 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FNTBP49356 437 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PDE6CP51160 858 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 VAV2P52735 878 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CDR2Q01850 454 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MRPL58Q14197 206 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GAS6Q14393 721 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TPGS2Q68CL5 300 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ALKBH5Q6P6C2 394 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TMEM270Q6UE05 265 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 Q6ZS52 159 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NOP9Q86U38 636 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC47A2Q86VL8 602 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RBBP8NLQ8NC74 664 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SHKBP1Q8TBC3 707 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DEPDC1BQ8WUY9 529 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RSPRY1Q96DX4 576 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF560Q96MR9 790 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MMS19Q96T76 1030 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLITRK6Q9H5Y7 841 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LZTFL1Q9NQ48 299 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 AFF4Q9UHB7 1163 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NAGPAQ9UK23 515 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NOCTQ9UK39 431 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC38A8A6NNN8 435 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HEPACAM2A8MVW5 462 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ARNTLO00327 626 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PPEF2O14830 753 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KRT86O43790 486 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RETP07949 1114 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ADRB1P08588 477 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 OR4Q2P0C623 313 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CHRNB1P11230 501 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CHRNB2P17787 502 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KCNA4P22459 653 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CXCL12P48061 93 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TAF6P49848 677 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF132P52740 706 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 EPHA5P54756 1037 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NRLP54845 237 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CDH8P55286 799 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KIF5AQ12840 1032 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SV2CQ496J9 727 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ARHGAP29Q52LW3 1261 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PPM1JQ5JR12 505 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 STXBP5Q5T5C0 1151 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HEATR6Q6AI08 1181 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SCARA5Q6ZMJ2 495 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NYAP1Q6ZVC0 841 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CELF5Q8N6W0 485 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NETO1Q8TDF5 533 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 EPS8L1Q8TE68 723 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC20A1Q8WUM9 679 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SUSD3Q96L08 255 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TSGA10Q9BZW7 698 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TRPV5Q9NQA5 729 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SEPT11Q9NVA2 429 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GDAP2Q9NXN4 497 aa11.56□□□□□ -0.56
HLA-DQA1-202ENST00000374949 A0A1W2PRU2 124 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 KPNA7A9QM74 516 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC30A4O14863 429 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PJA2O43164 708 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 VNN2O95498 520 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MMEP08473 750 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PAEPP09466 180 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 H2AFZP0C0S5 128 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FAM163BP0C2L3 166 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GZMAP12544 262 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TNNT1P13805 278 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PAX3P23760 479 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 GNA15P30679 374 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 HOXC13P31276 330 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ARHGAP25P42331 645 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RAP1GAPP47736 663 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ST3GAL2Q16842 350 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DNTTIP2Q5QJE6 756 aaKnown RBP11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TAF3Q5VWG9 929 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PRR23CQ6ZRP0 262 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 H2AFVQ71UI9 128 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TMC8Q8IU68 726 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 YAF2Q8IY57 180 aa11.55□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SPEM1Q8N4L4 309 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms