RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 CHMP6Q96FZ7 201 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 SERPINB12Q96P63 405 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 ADAM7Q9H2U9 754 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 CWH43Q9H720 699 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 UBN1Q9NPG3 1134 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 DDX56Q9NY93 547 aaKnown RBP16.27■□□□□ 0.2
CCDC40-202ENST00000374876 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.2
CCDC40-202ENST00000374876 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 KLRC2P26717 231 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ATP5DP30049 168 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 GRM5P41594 1212 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 RAP1GAPP47736 663 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 SCNN1GP51170 649 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 IFT88Q13099 833 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 QPCTQ16769 361 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 P3H1Q32P28 736 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 RNF187Q5TA31 235 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ZNF280BQ86YH2 543 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 INTS9Q9NV88 658 aaKnown RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ZNF148Q9UQR1 794 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 LRRD1A4D1F6 860 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 RFXAPO00287 272 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 NFICP08651 508 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 PBX3P40426 434 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 RNASELQ05823 741 aaKnown RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 CCDC38Q502W7 563 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 ZNF697Q5TEC3 545 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 GKAP1Q5VSY0 366 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 DRICH1Q6PGQ1 229 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 CEP128Q6ZU80 1094 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
CCDC40-202ENST00000374876 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 LHX5Q9H2C1 402 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 NINJ2Q9NZG7 142 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 SIX4Q9UIU6 781 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 DNPEPQ9ULA0 475 aa16.26■□□□□ 0.19
CCDC40-202ENST00000374876 EPOPA6NHQ4 379 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 LACTBL1A8MY62 500 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 B4GALT3O60512 393 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 DDHD2O94830 711 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 KRT3P12035 628 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 PSMA2P25787 234 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 PTPN7P35236 360 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 GRIN2CQ14957 1233 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 CACNA2D3Q8IZS8 1091 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 C1orf127Q8N9H9 656 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
CCDC40-202ENST00000374876 ACSF2Q96CM8 615 aaPredicted RBP16.25■□□□□ 0.19
CCDC40-202ENST00000374876 SEC16BQ96JE7 1060 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 CABS1Q96KC9 395 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 PWWP2AQ96N64 755 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 SYNCQ9H7C4 482 aa16.25■□□□□ 0.19
CCDC40-202ENST00000374876 hCG_1818297A0A087WSY0 165 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 ITGB3P05106 788 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 DRD4P21917 467 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 RFC1P35251 1148 aaPredicted RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 YARSP54577 528 aaKnown RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 CDH8P55286 799 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 ERVK-21P61565 698 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 PSMC1P62191 440 aaKnown RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 SLC10A6Q3KNW5 377 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 GLRA4Q5JXX5 417 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 TXNRD3NBQ6F5E7 133 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 JADE1Q6IE81 842 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 HIBCHQ6NVY1 386 aaPredicted RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 PRUNE1Q86TP1 453 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 EXOC3L1Q86VI1 746 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 LRRC43Q8N309 656 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 DEFB123Q8N688 67 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 URGCPQ8TCY9 931 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 CLP1Q92989 425 aaKnown RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 FOXP3Q9BZS1 431 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 NRDE2Q9H7Z3 1164 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 DNAJB4Q9UDY4 337 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 NT5C1B-RDH14C9J2C7 533 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 PTGESO14684 152 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 BMPR1AP36894 532 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 CDKN2BP42772 138 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 RAD23BP54727 409 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 C6orf89Q6UWU4 347 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 ALLCQ8N6M5 410 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
CCDC40-202ENST00000374876 FAXDC2Q96IV6 333 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms