RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 M0QYT0 321 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MAPK13O15264 365 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MAGEB2O15479 319 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 USP17L7P0C7H9 530 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 RPA3P35244 121 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 CDKN2BP42772 138 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 INHBEP58166 350 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MFSD10Q14728 455 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 NPHS2Q9NP85 383 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 ETNK2Q9NVF9 386 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 H0Y3Z8 333 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 CYB561D2O14569 222 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 ASAP2O43150 1006 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 UGT1A9O60656 530 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 BEST1O76090 585 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 INHBAP08476 426 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 KRT7P08729 469 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SETSIPP0DME0 302 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 NCAM1P13591 858 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 GOT1P17174 413 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 DESP17661 470 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 BRCC3P46736 316 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SULT1E1P49888 294 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SURF1Q15526 300 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 FBXO47Q5MNV8 452 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 NOTUMQ6P988 496 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 UGT1A7Q9HAW7 530 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 UGT1A10Q9HAW8 530 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 UGT1A8Q9HAW9 530 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 STRIP2Q9ULQ0 834 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SMIM28A0A1B0GU29 152 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 KPNA7A9QM74 516 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CES2O00748 559 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 PSTPIP1O43586 416 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CILPO75339 1184 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 UPP2O95045 317 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 FGFR1P11362 822 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CPA2P48052 419 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 VCPP55072 806 aaKnown RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SESN3P58005 492 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 HTRA3P83110 453 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 PTP4A2Q12974 167 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF484Q5JVG2 852 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 DEFB106AQ8N104 65 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 AVENQ9NQS1 362 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 FOCADQ5VW36 1801 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 GPD2P43304 727 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SLC8A3P57103 927 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 TRNP1Q6NT89 227 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ZCCHC23Q6ZST2 131 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 KATNAL2Q8IYT4 538 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ARRDC4Q8NCT1 418 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SNRNP25Q9BV90 132 aaKnown RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 KBTBD13C9JR72 458 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CHUKO15111 745 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 TMEM63AO94886 807 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CRYMQ14894 314 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SOWAHAQ2M3V2 549 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 MARCH8Q5T0T0 291 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 LVRNQ6Q4G3 990 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ARHGEF18Q6ZSZ5 1173 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 HFE2Q6ZVN8 426 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 PID1Q7Z2X4 250 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 IGDCC3Q8IVU1 814 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 MREGQ8N565 214 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 CCDC185Q8N715 623 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 TMEM237Q96Q45 408 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 MECRQ9BV79 373 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-203ENST00000374429 PRM3Q9NNZ6 103 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SLC12A6Q9UHW9 1150 aa11.25□□□□□ -0.61
CXCL12-203ENST00000374429 SIGLEC16A6NMB1 481 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 DNM1LO00429 736 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 PAPSS1O43252 624 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-203ENST00000374429 SNUPNO95149 360 aaKnown RBP11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MT-ND3P03897 115 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 ADRA1DP25100 572 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 TNFRSF8P28908 595 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 ITKQ08881 620 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 DUSP28Q4G0W2 176 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 SLC27A1Q6PCB7 646 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 PIGZQ86VD9 579 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 ADGRF2Q8IZF7 708 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 LRRC8CQ8TDW0 803 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MOCOSQ96EN8 888 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms