RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ARL4CP56559 192 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ACAP1Q15027 740 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 FAM47EQ6ZV65 393 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 FBF1Q8TES7 1133 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TTC25Q96NG3 672 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 FOXP3Q9BZS1 431 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 C12orf65Q9H3J6 166 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 DHX35Q9H5Z1 703 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 GOLGA8RI6L899 631 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 PIRO00625 290 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ENDOD1O94919 500 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 CTSHP09668 335 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ZNF157P51786 506 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 BCAR1P56945 870 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 WDR4P57081 412 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ADAM17P78536 824 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 TTC31Q49AM3 519 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 PIGWQ7Z7B1 504 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 PYROXD2Q8N2H3 581 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 RAB6BQ9NRW1 208 aa16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 RARBP10826 455 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 FOXN2P32314 431 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 OSTM1Q86WC4 334 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 PALM2Q8IXS6 379 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 CCDC185Q8N715 623 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 SMG8Q8ND04 991 aaKnown RBP16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 CCDC134Q9H6E4 229 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 RABGEF1Q9UJ41 708 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 DERAQ9Y315 318 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 BEST1O76090 585 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 FKBP1BP68106 108 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 PITX1P78337 314 aaPredicted RBP16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 GBE1Q04446 702 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 STILQ15468 1287 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 PCGF5Q86SE9 256 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 CCDC110Q8TBZ0 833 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 FAM149B1Q96BN6 582 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 FAF2Q96CS3 445 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 ABCF3Q9NUQ8 709 aa16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 TIMM13Q9Y5L4 95 aaPredicted RBP16.65■□□□□ 0.26
CNKSR1-202ENST00000374253 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 UNCXA6NJT0 531 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 APOL1O14791 398 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 RPA3P35244 121 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 ELK3P41970 407 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 TFDP2Q14188 446 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM131BQ86XD5 332 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 MAP7D3Q8IWC1 876 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 ADGRF2Q8IZF7 708 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 PDIK1LQ8N165 341 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 CCT6BQ92526 530 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM47DPA6NHR8 397 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 NDUFV1P49821 464 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 BST2Q10589 180 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 FSCN1Q16658 493 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 BOLA3Q53S33 107 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 CEP128Q6ZU80 1094 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 CTU1Q7Z7A3 348 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 AGGF1Q8N302 714 aaeCLIP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 ANKRD52Q8NB46 1076 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 LPPQ93052 612 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 GRID1Q9ULK0 1009 aa16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-202ENST00000374253 SNX3O60493 162 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ZBED1O96006 694 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 CYP2F1P24903 491 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 TAF6P49848 677 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 CPT1AP50416 773 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 LILRA4P59901 499 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ACTN3Q08043 901 aaPredicted RBP16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ADIGQ0VDE8 80 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ANKS4BQ8N8V4 417 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 TBCBQ99426 244 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 PAFAH2Q99487 392 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ETNK2Q9NVF9 386 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 GGA2Q9UJY4 613 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 MYO18AQ92614 2054 aaKnown RBP16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 HAS3O00219 553 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 PTGESO14684 152 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 HUS1O60921 280 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 KRT4P19013 534 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 CA4P22748 312 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms