RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TLK2Q86UE8 772 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 IGDCC3Q8IVU1 814 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 MAP7D3Q8IWC1 876 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 KBTBD7Q8WVZ9 684 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 GOLGA2P5Q9HBQ8 144 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 TMEM51Q9NW97 253 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 SLC5A4Q9NY91 659 aa19.54■□□□□ 0.72
USP49-202ENST00000373010 SMIM28A0A1B0GU29 152 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 TREHO43280 583 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 TAC1P20366 129 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 STIP1P31948 543 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 ATXN1P54253 815 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 HDAC4P56524 1084 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 GEMIN4P57678 1058 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 PDK2Q15119 407 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 TRPM8Q7Z2W7 1104 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 UNC93AQ86WB7 457 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PALM2Q8IXS6 379 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PDIK1LQ8N165 341 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PCDH19Q8TAB3 1148 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 MAGEB5Q9BZ81 275 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 USP29Q9HBJ7 922 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 UBQLN1Q9UMX0 589 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 CHMP2BQ9UQN3 213 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 HNRNPH1P31943 449 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 PHBP35232 272 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 CDC42EP1Q00587 391 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 RNASELQ05823 741 aaKnown RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 SNX17Q15036 470 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PPP6R3Q5H9R7 873 aaPredicted RBP19.53■□□□□ 0.72
USP49-202ENST00000373010 FBXO47Q5MNV8 452 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 CGB2Q6NT52 195 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 DENND1AQ8TEH3 1009 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 SGSM3Q96HU1 749 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 SMC6Q96SB8 1091 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PHACTR1Q9C0D0 580 aa19.53■□□□□ 0.72
USP49-202ENST00000373010 PIRO00625 290 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 APOL1O14791 398 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 KCNN4O15554 427 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 ASMTLO95671 621 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 LCP1P13796 627 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 RPA3P35244 121 aaPredicted RBP19.52■□□□□ 0.72
USP49-202ENST00000373010 BCAR1P56945 870 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 IL9RQ01113 521 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 ARHGAP17Q68EM7 881 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 SPATA21Q7Z572 469 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 TEKT4Q8WW24 435 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 SLC40A1Q9NP59 571 aa19.52■□□□□ 0.72
USP49-202ENST00000373010 PRPF4O43172 522 aaKnown RBP eCLIP19.52■□□□□ 0.71
USP49-202ENST00000373010 CELF2O95319 508 aaKnown RBP19.52■□□□□ 0.71
USP49-202ENST00000373010 RBL1P28749 1068 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 GNL1P36915 607 aaPredicted RBP19.52■□□□□ 0.71
USP49-202ENST00000373010 ELK3P41970 407 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 BEX3Q00994 111 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 SOX4Q06945 474 aaPredicted RBP19.52■□□□□ 0.71
USP49-202ENST00000373010 GPR162Q16538 588 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 FAM133BQ5BKY9 247 aaKnown RBP19.52■□□□□ 0.71
USP49-202ENST00000373010 PAFAH2Q99487 392 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 ACSS3Q9H6R3 686 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 HAUS2Q9NVX0 235 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 GRID1Q9ULK0 1009 aa19.52■□□□□ 0.71
USP49-202ENST00000373010 KPNA7A9QM74 516 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 MYL3P08590 195 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 PSEN2P49810 448 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 ADAM17P78536 824 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 KCNJ11Q14654 390 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 CCL14Q16627 93 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 MORN1Q5T089 497 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 UBXN11Q5T124 520 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 FAM47EQ6ZV65 393 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 STK32AQ8WU08 396 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 FAF2Q96CS3 445 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 AVILO75366 819 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 SUN1O94901 812 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 ZNF865P0CJ78 1059 aaPredicted RBP19.51■□□□□ 0.71
USP49-202ENST00000373010 CA4P22748 312 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 BST2Q10589 180 aaKnown RBP19.51■□□□□ 0.71
USP49-202ENST00000373010 SLC1A5Q15758 541 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 FAXCQ5TGI0 409 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 ANKRD52Q8NB46 1076 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 SPOCK2Q92563 424 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 PPCSQ9HAB8 311 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 RAB6BQ9NRW1 208 aa19.51■□□□□ 0.71
USP49-202ENST00000373010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.71
USP49-202ENST00000373010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.5■□□□□ 0.71
USP49-202ENST00000373010 MAP2K5Q13163 448 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 RASA2Q15283 850 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 SLC9A4Q6AI14 798 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 USP6NLQ92738 828 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 TBCBQ99426 244 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 SNX25Q9H3E2 840 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 SENP1Q9P0U3 644 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 SMAPO00193 183 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 CD4P01730 458 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 KRT4P19013 534 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 TGM2P21980 687 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 BCAT1P54687 386 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 FKBP1BP68106 108 aa19.5■□□□□ 0.71
USP49-202ENST00000373010 ADGRD1Q6QNK2 874 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms