RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 SLC25A3Q00325 362 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 COX10Q12887 443 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 SLC10A5Q5PT55 438 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 TCHHL1Q5QJ38 904 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ATAD3BQ5T9A4 648 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 SDE2Q6IQ49 451 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 AADACL2Q6P093 401 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 DYMQ7RTS9 669 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 IGFN1Q86VF2 1251 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GRK7Q8WTQ7 553 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 OXNAD1Q96HP4 312 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 FEM1CQ96JP0 617 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MTO1Q9Y2Z2 717 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CPQQ9Y646 472 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 USP17L21D6R901 530 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MEN1O00255 615 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ASNA1O43681 348 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 IL2RBP14784 551 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CD247P20963 164 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GJC1P36383 396 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 PTPN9P43378 593 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 RPL26P61254 145 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MAPK11Q15759 364 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MAN2A1Q16706 1144 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 RARS2Q5T160 578 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 FAM182AQ5T1J6 154 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 DSG4Q86SJ6 1040 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 DCP2Q8IU60 420 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 SNX29P2Q8IUI4 249 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CATSPER1Q8NEC5 780 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GIMAP5Q96F15 307 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 PDE8BO95263 885 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 MCF2P10911 925 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 NAPAP54920 295 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ARL4CP56559 192 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ECT2LQ008S8 904 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 KCNC4Q03721 635 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 PON2Q15165 354 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 PRPF39Q86UA1 669 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 LRRC57Q8N9N7 239 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 BCL7CQ8WUZ0 217 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 HIPK3Q9H422 1215 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 APOBEC2Q9Y235 224 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SORBS2O94875 1100 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TTC4O95801 387 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 KRT8P05787 483 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 KRT7P08729 469 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 MUTP22033 750 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 NDST2P52849 883 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 CCDC14Q49A88 953 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 RSBN1Q5VWQ0 802 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 FAM122CQ6P4D5 195 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ALKBH5Q6P6C2 394 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TCAIMQ8N3R3 496 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 CHCHD4Q8N4Q1 142 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 CDC26Q8NHZ8 85 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ADAMTS16Q8TE57 1224 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TSG101Q99816 390 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ZSCAN5AQ9BUG6 496 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ACAT2Q9BWD1 397 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TSSK1BQ9BXA7 367 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SERHL2Q9H4I8 314 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 KLF15Q9UIH9 416 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 RAB26Q9ULW5 256 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 DNM3Q9UQ16 869 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 RGPD8O14715 1765 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 hCG_2039718K7EN88 272 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 MAP4P27816 1152 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SERPINB1P30740 379 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 BMPR1AP36894 532 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 DRG2P55039 364 aaKnown RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 NME3Q13232 169 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 CLVS2Q5SYC1 327 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 FAM205BPQ63HN1 556 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 SNX32Q86XE0 403 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 GALNT13Q8IUC8 556 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-203ENST00000372917 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF398Q8TD17 642 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 RILPQ96NA2 401 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 HOXD1Q9GZZ0 328 aa11.04□□□□□ -0.64
TRERF1-203ENST00000372917 LTN1O94822 1766 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms