RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ADGRE3Q9BY15 652 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 SHCBP1LQ9BZQ2 653 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 MTM1Q13496 603 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 FAXCQ5TGI0 409 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.51
VCL-202ENST00000372755 CPSF4O95639 269 aaKnown RBP11.9□□□□□ -0.51
VCL-202ENST00000372755 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.51
VCL-202ENST00000372755 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.51
VCL-202ENST00000372755 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.51
VCL-202ENST00000372755 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.51
VCL-202ENST00000372755 NOD2Q9HC29 1040 aa11.9□□□□□ -0.51
VCL-202ENST00000372755 HECW2Q9P2P5 1572 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 OVGP1Q12889 678 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 RCN1Q15293 331 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 C16orf62Q7Z3J2 963 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 SLC44A2Q8IWA5 706 aaPredicted RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 SCUBE1Q8IWY4 988 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 ADGRF2Q8IZF7 708 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 CYB561D2O14569 222 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 GRK2P25098 689 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 GTF2A2P52657 109 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 SEC24CP53992 1094 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 RHOAP61586 193 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 ZCCHC8Q6NZY4 707 aaKnown RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 CASKIN2Q8WXE0 1202 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 TBC1D13Q9NVG8 400 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 TAGLN3Q9UI15 199 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 GNG14A0A1W2PPG7 69 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 MSH4O15457 936 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 KCNQ2O43526 872 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 GLP2RO95838 553 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 RHOCP08134 193 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 PCNAP12004 261 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 TALDO1P37837 337 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 MCL1Q07820 350 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 C1DQ13901 141 aaKnown RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
VCL-202ENST00000372755 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 TRIM24O15164 1050 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 SGPL1O95470 568 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 LHX1P48742 406 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 FAM172AQ8WUF8 416 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 FICDQ9BVA6 458 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 O00370 1275 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 PLA2G6O60733 806 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
VCL-202ENST00000372755 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
VCL-202ENST00000372755 MED14O60244 1454 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 LSM8O95777 96 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 TFRCP02786 760 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 CSF1RP07333 972 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 CALB2P22676 271 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 PON1P27169 355 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NT5DC4Q86YG4 428 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ZNF682O95780 498 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 GSTM1P09488 218 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NQO1P15559 274 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 MTA1Q13330 715 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MTSS1LQ765P7 747 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ACOT1Q86TX2 421 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MDM1Q8TC05 714 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ELOVL6Q9H5J4 265 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NCKIPSDQ9NZQ3 722 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 POLG2Q9UHN1 485 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ACOT9Q9Y305 439 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NR5A2O00482 541 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 GYS1P13807 737 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 JAK1P23458 1154 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 POU1F1P28069 291 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 PPP2R1BP30154 601 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 HUNKP57058 714 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 PLIN5Q00G26 463 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 AMHR2Q16671 573 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 FAM45BPQ6NSW5 357 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 STRA8Q7Z7C7 330 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 SLC26A11Q86WA9 606 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 RUSC1Q9BVN2 902 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 VTA1Q9NP79 307 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms