RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ATICP31939 592 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 GCKP35557 465 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 SERPINB4P48594 390 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 TFDP2Q14188 446 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 C15orf59Q2T9L4 293 aaPredicted RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 CELF3Q5SZQ8 465 aaKnown RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 FAM182AQ5T1J6 154 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 TTC39BQ5VTQ0 682 aaPredicted RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 DSTYKQ6XUX3 929 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 CAND1Q86VP6 1230 aaKnown RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.283e-8■■■□□ 15.9
CTPS1-202ENST00000372621 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 RXFP2Q8WXD0 754 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 TTC17Q96AE7 1141 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 FAF2Q96CS3 445 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 FRMD8Q9BZ67 464 aaPredicted RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 PAK5Q9P286 719 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 E5RJQ4 531 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 PQLC3Q8N755 202 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 FGD4Q96M96 766 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 NFKBIZQ9BYH8 718 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
CTPS1-202ENST00000372621 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.29
CTPS1-202ENST00000372621 CXorf49A8MYA2 514 aaPredicted RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 PFKMP08237 780 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 STAG3L1P0CL83 205 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 INCA1Q0VD86 236 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 HSF5Q4G112 596 aaPredicted RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 FAM183BPQ6ZVS7 135 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 TEX9Q8N6V9 391 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 ZBTB10Q96DT7 871 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 ARHGEF4Q9NR80 690 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 A6NHS1 94 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 H0Y3Z8 333 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 PDGFRAP16234 1089 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 ATP6V1C1P21283 382 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 CCNFP41002 786 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 CCDC14Q49A88 953 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 SLC9A4Q6AI14 798 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 RINLQ6ZS11 566 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 USP6NLQ92738 828 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 OXNAD1Q96HP4 312 aaPredicted RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 TRIM6Q9C030 488 aaPredicted RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 IFT122Q9HBG6 1241 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 MKS1Q9NXB0 559 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 TAS2R1Q9NYW7 299 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 PLLPQ9Y342 182 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 POLR2AP24928 1970 aaKnown RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 PAPPA2Q9BXP8 1791 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 BCLAF3A2AJT9 711 aaKnown RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 TRIM49D1C9J1S8 452 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 H7C0C1 242 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 RFPL1O75677 317 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 MAGEA3P43357 314 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 ATP5OP48047 213 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 PDK2Q15119 407 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 CES4AQ5XG92 561 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 CFAP36Q96G28 342 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 HEXIM2Q96MH2 286 aaKnown RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 C7orf26Q96N11 449 aa13.26□□□□□ -0.29
CTPS1-202ENST00000372621 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
CTPS1-202ENST00000372621 MCM3APO60318 1980 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 DPYSL4O14531 572 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 COPEO14579 308 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 KCNN4O15554 427 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 MYL2P10916 166 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 TGM2P21980 687 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 RBL1P28749 1068 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 GCLCP48506 637 aaPredicted RBP13.25□□□□□ -0.29
CTPS1-202ENST00000372621 CLCN3P51790 818 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 AMHR2Q16671 573 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 FAM187BQ17R55 369 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 EFCAB12Q6NXP0 572 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 TTC7BQ86TV6 843 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
CTPS1-202ENST00000372621 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 BARX2Q9UMQ3 279 aaPredicted RBP13.25□□□□□ -0.29
CTPS1-202ENST00000372621 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 FAM237BA0A1B0GVD1 139 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 SNRPAP09012 282 aaKnown RBP13.25□□□□□ -0.29
CTPS1-202ENST00000372621 RARBP10826 455 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 ACADSP16219 412 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 PPM1NQ8N819 430 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 TEKT4Q8WW24 435 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 SIRPGQ9P1W8 387 aa13.25□□□□□ -0.29
CTPS1-202ENST00000372621 ZC3H7BQ9UGR2 993 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms