RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF296Q8WUU4 475 aaPredicted RBP26.09■■□□□ 1.77
CTSA-203ENST00000372459 KRT82Q9NSB4 513 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 MMRN1Q13201 1228 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 SNRNP25Q9BV90 132 aaKnown RBP26.09■■□□□ 1.77
CTSA-203ENST00000372459 PCDH9Q9HC56 1237 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 AAASQ9NRG9 546 aa26.09■■□□□ 1.77
CTSA-203ENST00000372459 ARVCFO00192 962 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 NDC80O14777 642 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 INPPL1O15357 1258 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 CHKAP35790 457 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 MAP3K7CLP57077 242 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 MRPS5P82675 430 aaKnown RBP26.08■■□□□ 1.77
CTSA-203ENST00000372459 SLC29A2Q14542 456 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 HIBCHQ6NVY1 386 aaPredicted RBP26.08■■□□□ 1.77
CTSA-203ENST00000372459 FAM35AQ86V20 835 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 SIX6OS1Q8N1H7 587 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 GLIS1Q8NBF1 620 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 MYCBPAPQ8TBZ2 947 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.08■■□□□ 1.77
CTSA-203ENST00000372459 PCED1BQ96HM7 432 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 RNF157Q96PX1 679 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 CENPHQ9H3R5 247 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 DSEQ9UL01 958 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 PTCH2Q9Y6C5 1203 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 FRMPD3Q5JV73 1810 aa26.08■■□□□ 1.77
CTSA-203ENST00000372459 MYBPHLA2RUH7 354 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 DNALI1O14645 258 aaPredicted RBP26.07■■□□□ 1.76
CTSA-203ENST00000372459 RIPK2O43353 540 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 EOMESO95936 686 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 CYP11A1P05108 521 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 TFE3P19532 575 aaPredicted RBP26.07■■□□□ 1.76
CTSA-203ENST00000372459 MATKP42679 507 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 ADCY1Q08828 1119 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 ERMARDQ5T6L9 678 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 STRADAQ7RTN6 431 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 SH2D3CQ8N5H7 860 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 FAM149B1Q96BN6 582 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 KBTBD13C9JR72 458 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 MCF2LO15068 1137 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 DAB1O75553 588 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 AP1G2O75843 785 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 ZSCAN5DPP0CG00 497 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 MBTPS1Q14703 1052 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 KRT71Q3SY84 523 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 ZC3H12AQ5D1E8 599 aaKnown RBP26.07■■□□□ 1.76
CTSA-203ENST00000372459 SLC24A5Q71RS6 500 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 HOOK3Q86VS8 718 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 FOXP3Q9BZS1 431 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 PCDH18Q9HCL0 1135 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 GPATCH2LQ9NWQ4 482 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 PHF24Q9UPV7 400 aa26.07■■□□□ 1.76
CTSA-203ENST00000372459 C9IYK1 514 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 IFNB1P01574 187 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 ETS1P14921 441 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 BRCC3P46736 316 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 EIF3EP60228 445 aaKnown RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 GPS1Q13098 491 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 PAN2Q504Q3 1202 aaKnown RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 AGBL2Q5U5Z8 902 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 CEP128Q6ZU80 1094 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 SRLQ86TD4 932 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 RTN4RL1Q86UN2 441 aaPredicted RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 RSAD2Q8WXG1 361 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 ACBD6Q9BR61 282 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 CDC42EP4Q9H3Q1 356 aaKnown RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 TPX2Q9ULW0 747 aaKnown RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 ARHGEF37A1IGU5 675 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 ZNF487B1APH4 448 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 I3L4J1 428 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 M0QZQ0 153 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 FBXO21O94952 628 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 PECAM1P16284 738 aaPredicted RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 YWHAZP63104 245 aaKnown RBP26.06■■□□□ 1.76
CTSA-203ENST00000372459 DCLRE1AQ6PJP8 1040 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 GLB1LQ6UWU2 654 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 CD300LGQ6UXG3 332 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 DEFB106AQ8N104 65 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 P3H4Q92791 437 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 ZNF670Q9BS34 389 aa26.06■■□□□ 1.76
CTSA-203ENST00000372459 SHBGP04278 402 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 TKTL1P51854 596 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 NOMO1Q15155 1222 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 SLC25A52Q3SY17 297 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 CROCCP2Q86T23 111 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 SMOQ99835 787 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 ADAM33Q9BZ11 813 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 ADAM7Q9H2U9 754 aa26.05■■□□□ 1.76
CTSA-203ENST00000372459 IL4RP24394 825 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 CA9Q16790 459 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 ANKRD20A8PQ5CZ79 823 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 ZCCHC9Q8N567 271 aaKnown RBP26.04■■□□□ 1.76
CTSA-203ENST00000372459 HASPINQ8TF76 798 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 RSPH1Q8WYR4 309 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 NDRG1Q92597 394 aaKnown RBP26.04■■□□□ 1.76
CTSA-203ENST00000372459 SMARCD1Q96GM5 515 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 RTP3Q9BQQ7 232 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 SEZ6LQ9BYH1 1024 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 TSC2P49815 1807 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 APOL1O14791 398 aa26.04■■□□□ 1.76
CTSA-203ENST00000372459 RBP3P10745 1247 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms