RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MSR1P21757 451 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 SPIRE1Q08AE8 756 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 PIGHQ14442 188 aaPredicted RBP15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 PROX1Q92786 737 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 SYNDIG1Q9H7V2 258 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 IFI30P13284 250 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 AP3S1Q92572 193 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 CLIC5Q9NZA1 410 aa15.77■□□□□ 0.12
GTF3C4-201ENST00000372146 TMCC2O75069 709 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 FSBPO95073 299 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 CRKP46108 304 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 PTSQ03393 145 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 THNSL1Q8IYQ7 743 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 PNKPQ96T60 521 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 FOXP3Q9BZS1 431 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 TIMMDC1Q9NPL8 285 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 SH3GLB2Q9NR46 395 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 SPEF1Q9Y4P9 236 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 P4HBP07237 508 aaKnown RBP15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 CYP21A2P08686 494 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 TGM2P21980 687 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 SLC26A3P40879 764 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 PHKG1Q16816 387 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 PPIL6Q8IXY8 311 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 KCTD2Q14681 263 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 IRGCQ6NXR0 463 aa15.77■□□□□ 0.11
GTF3C4-201ENST00000372146 A0A1W2PQC6 194 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 CACNB2Q08289 660 aaPredicted RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 FAM71DQ8N9W8 422 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 KRT35Q92764 455 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 TYSND1Q2T9J0 566 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 PRMT9Q6P2P2 845 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 PPP1R2P1Q96PQ5 205 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 CYP26A1O43174 497 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ZNF846Q147U1 533 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 MSANTD1Q6ZTZ1 278 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ERCC2P18074 760 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 TUFMP49411 452 aaKnown RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 SWI5Q1ZZU3 235 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 PNMA6FA0A0J9YX94 578 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ADORA1P30542 326 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 CCNG1P51959 295 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 LSM3P62310 102 aaKnown RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 CASKIN2Q8WXE0 1202 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 HAVCR1Q96D42 359 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 L1RE1Q9UN81 338 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ARHGAP31Q2M1Z3 1444 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 HAT1O14929 419 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 SOAT2O75908 522 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 EAF2Q96CJ1 260 aaPredicted RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 STK25O00506 426 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 NCK1P16333 377 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 NPEPPSP55786 919 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 ZRANB3Q5FWF4 1079 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 SLC9A4Q6AI14 798 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 PPP1R10Q96QC0 940 aaKnown RBP15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 COMMD3-BMI1R4GMX3 469 aa15.76■□□□□ 0.11
GTF3C4-201ENST00000372146 GNG14A0A1W2PPG7 69 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 TM9SF1O15321 606 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CCZ1BP86790 482 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CCZ1P86791 482 aaPredicted RBP15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CHRNDQ07001 517 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 C1orf189Q5VU69 101 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 HPS6Q86YV9 775 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 IPMKQ8NFU5 416 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 BHLHE41Q9C0J9 482 aaPredicted RBP15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 RPH3AQ9Y2J0 694 aaPredicted RBP15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CFAP74Q9C0B2 1584 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 LOC110117498-PIK3R3F6TDL0 507 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 ZNF432O94892 652 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 IFNA14P01570 189 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 ALOX5P09917 674 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 IST1P53990 364 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 USP38Q8NB14 1042 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 SPIRE2Q8WWL2 714 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 ARL4DP49703 201 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 ZMYM1Q5SVZ6 1142 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 DENND1BQ6P3S1 775 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 PARP8Q8N3A8 854 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 STK32AQ8WU08 396 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 CCDC126Q96EE4 140 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 COX4I2Q96KJ9 171 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 RNF145Q96MT1 663 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 SLC9A8Q9Y2E8 581 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 SHANK2Q9UPX8 1470 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 LARGE1O95461 756 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 TOP3BO95985 862 aaKnown RBP15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 UGT3A1Q6NUS8 523 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 C7orf25Q9BPX7 421 aa15.75■□□□□ 0.11
GTF3C4-201ENST00000372146 TRPV5Q9NQA5 729 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms