RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KBTBD13C9JR72 458 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CDH5P33151 784 aaPredicted RBP12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SPDYCQ5MJ68 293 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 LCLAT1Q6UWP7 414 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CCDC185Q8N715 623 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 NKD2Q969F2 451 aaPredicted RBP12.24□□□□□ -0.45
PDE6C-201ENST00000371447 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 MCRS1Q96EZ8 462 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 ETNK2Q9NVF9 386 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CLUHO75153 1309 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CASTOR2A6NHX0 329 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 ADRA1DP25100 572 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 GCAP28676 217 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 ADIGQ0VDE8 80 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 PPP1R2P3Q6NXS1 205 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 ZNF449Q6P9G9 518 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 LVRNQ6Q4G3 990 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CROCCP2Q86T23 111 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 MAP7D3Q8IWC1 876 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 PCDH19Q8TAB3 1148 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 RMDN2Q96LZ7 410 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 AGAP3Q96P47 875 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 PARK7Q99497 189 aaKnown RBP12.24□□□□□ -0.45
PDE6C-201ENST00000371447 RHOBTB2Q9BYZ6 727 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 RSAD1Q9HA92 442 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CYP3A43Q9HB55 503 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
PDE6C-201ENST00000371447 CCDC195A0A1B0GUA6 201 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 APOL1O14791 398 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 HUS1O60921 280 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 BEST1O76090 585 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 APOC2P02655 101 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 ATICP31939 592 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 GRM5P41594 1212 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 COPS2P61201 443 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 IL9RQ01113 521 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 OLIG2Q13516 323 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 KBTBD12Q3ZCT8 623 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 C9orf57Q5W0N0 161 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 WSCD1Q658N2 575 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SPATA21Q7Z572 469 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 PRPF39Q86UA1 669 aaKnown RBP12.24□□□□□ -0.45
PDE6C-201ENST00000371447 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 PLD5Q8N7P1 536 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 APPL2Q8NEU8 664 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 LGMNQ99538 433 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 AP5M1Q9H0R1 490 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SLC17A7Q9P2U7 560 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SLC17A6Q9P2U8 582 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 SNX3O60493 162 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 UGT1A9O60656 530 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 GOT1P17174 413 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 ERFP50548 548 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 SLC6A3Q01959 620 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 SNX17Q15036 470 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 CES3Q6UWW8 571 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 DENND5BQ6ZUT9 1274 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 CMASQ8NFW8 434 aaPredicted RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 CCHCR1Q8TD31 782 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 RNF157Q96PX1 679 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 WDR83Q9BRX9 315 aaKnown RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 UGT1A7Q9HAW7 530 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 UGT1A10Q9HAW8 530 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 UGT1A8Q9HAW9 530 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 USP15Q9Y4E8 981 aaPredicted RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 MYADML2A6NDP7 307 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 CYP2F1P24903 491 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 HDAC4P56524 1084 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 SESN2P58004 480 aaPredicted RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 SPARCL1Q14515 664 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 POLNQ7Z5Q5 900 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 TRABD2AQ86V40 505 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 DEPDC1BQ8WUY9 529 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 EDEM1Q92611 657 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 ATXN7L3BQ96GX2 97 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 GAD1Q99259 594 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 TBCBQ99426 244 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 GRID1Q9ULK0 1009 aa12.23□□□□□ -0.45
PDE6C-201ENST00000371447 DRG1Q9Y295 367 aaKnown RBP12.23□□□□□ -0.45
PDE6C-201ENST00000371447 C2orf71A6NGG8 1288 aa12.22□□□□□ -0.45
PDE6C-201ENST00000371447 IGF2BP3O00425 579 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDE6C-201ENST00000371447 CAPN9O14815 690 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms