RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 RPLP0P6Q8NHW5 317 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 CD101Q93033 1021 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 FUCA2Q9BTY2 467 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 NUDT5Q9UKK9 219 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 HCN2Q9UL51 889 aa11.62□□□□□ -0.55
EXOSC1-202ENST00000370885 TULP2O00295 520 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 MDM4O15151 490 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 TRIM24O15164 1050 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 FAM200BP0CF97 657 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 DRD1P21728 446 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 HOXA6P31267 233 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 MXI1P50539 228 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 NRLP54845 237 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 HECTD3Q5T447 861 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 EMC10Q5UCC4 262 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 WDR5BQ86VZ2 330 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 LONP2Q86WA8 852 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 BBS7Q8IWZ6 715 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 PHTF2Q8N3S3 785 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 UBR7Q8N806 425 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 FBXL13Q8NEE6 735 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 OVCA2Q8WZ82 227 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 SLC35C1Q96A29 364 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 HHIPQ96QV1 700 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 KLF16Q9BXK1 252 aaPredicted RBP11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 ZDHHC4Q9NPG8 344 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 CISHQ9NSE2 258 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 RMND1Q9NWS8 449 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 EHD2Q9NZN4 543 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
EXOSC1-202ENST00000370885 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 A0A1W2PQH9 124 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 GOLGA6L4A6NEF3 574 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 TLR5O60602 858 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 NFATC1O95644 943 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 CALCAP01258 141 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 IRF1P10914 325 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 EPB41P11171 864 aaKnown RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 ACO1P21399 889 aaKnown RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 KIF11P52732 1056 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 SEC13P55735 322 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 DCAF17Q5H9S7 520 aaPredicted RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 LY6G5CQ5SRR4 150 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 TTI2Q6NXR4 508 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 BHLHA9Q7RTU4 235 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 USP33Q8TEY7 942 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 NDRG1Q92597 394 aaKnown RBP11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 KAT5Q92993 513 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 MED15Q96RN5 788 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 HINFPQ9BQA5 517 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 COMMD8Q9NX08 183 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 SCML2Q9UQR0 700 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
EXOSC1-202ENST00000370885 MYO18AQ92614 2054 aaKnown RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 BIN1O00499 593 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 GABBR2O75899 941 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 ID4P47928 161 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 TUBP50607 506 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 PDE6CP51160 858 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 SPEM2Q0P670 501 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 LRMPQ12912 555 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 MORC3Q14149 939 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 SIM2Q14190 667 aaPredicted RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 C2orf27AQ580R0 203 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 TCERG1LQ5VWI1 586 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 PRR23BQ6ZRT6 265 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 RBM43Q6ZSC3 357 aaKnown RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 TMEM25Q86YD3 366 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 ETFBKMTQ8IXQ9 262 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 FAM160A2Q8N612 972 aaPredicted RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 TMEM176AQ96HP8 235 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 HEXIM2Q96MH2 286 aaKnown RBP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 CLSTN2Q9H4D0 955 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 CYLDQ9NQC7 956 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 SPAG17Q6Q759 2223 aa11.59□□□□□ -0.55
EXOSC1-202ENST00000370885 A0A0A0MRY4 1105 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 RNF225M0QZC1 329 aaPredicted RBP11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 DCLK1O15075 740 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 SMC2O95347 1197 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 KLKB1P03952 638 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 ADH5P11766 374 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 RARGP13631 454 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 KIR2DL1P43626 348 aaPredicted RBP11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 STX17P56962 302 aa11.58□□□□□ -0.56
EXOSC1-202ENST00000370885 AMPD2Q01433 879 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms