RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 EXD1Q8NHP7 514 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 SPATA18Q8TC71 538 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 FBXO25Q8TCJ0 367 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 ATG4AQ8WYN0 398 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 DCLK3Q9C098 648 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 AAASQ9NRG9 546 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 TJP2Q9UDY2 1190 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 TSPAN16Q9UKR8 245 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 KIAA1257Q9ULG3 409 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.13■□□□□ 0.49
UBE3D-203ENST00000369747 F8VP50 259 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 FGF18O76093 207 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 ECEL1O95672 775 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 CA3P07451 260 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 OR4Q2P0C623 313 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 SSR1P43307 286 aaKnown RBP18.13■□□□□ 0.49
UBE3D-203ENST00000369747 RGS19P49795 217 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 SNX1Q13596 522 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 CNGA2Q16280 664 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 RSPO2Q6UXX9 243 aaPredicted RBP18.13■□□□□ 0.49
UBE3D-203ENST00000369747 THEM5Q8N1Q8 247 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 KLHL23Q8NBE8 558 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 SLC2A14Q8TDB8 520 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 UBLCP1Q8WVY7 318 aaPredicted RBP18.13■□□□□ 0.49
UBE3D-203ENST00000369747 C17orf80Q9BSJ5 609 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 HEMGNQ9BXL5 484 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 LCMT1Q9UIC8 334 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 CDH9Q9ULB4 789 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 STRIP2Q9ULQ0 834 aa18.13■□□□□ 0.49
UBE3D-203ENST00000369747 R3HDM2Q9Y2K5 976 aaKnown RBP18.13■□□□□ 0.49
UBE3D-203ENST00000369747 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 CLDN5O00501 218 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 C2CD2LO14523 706 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 MICAL2O94851 1124 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 GBP1P32455 592 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 ATP13A4Q4VNC1 1196 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
UBE3D-203ENST00000369747 LCLAT1Q6UWP7 414 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 NIPA2Q8N8Q9 360 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 UBA3Q8TBC4 463 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 PCED1BQ96HM7 432 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 CPXM1Q96SM3 734 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 OSBPL8Q9BZF1 889 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
UBE3D-203ENST00000369747 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
UBE3D-203ENST00000369747 SOD2P04179 222 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 ADORA2BP29275 332 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PPM1AP35813 382 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PIGHQ14442 188 aaPredicted RBP18.11■□□□□ 0.49
UBE3D-203ENST00000369747 CTXN3Q4LDR2 81 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 CEP85LQ5SZL2 805 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PAQR9Q6ZVX9 377 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 DDX53Q86TM3 631 aaKnown RBP18.11■□□□□ 0.49
UBE3D-203ENST00000369747 TTC30AQ86WT1 665 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 MYCBPAPQ8TBZ2 947 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PKMYT1Q99640 499 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PLXNA4Q9HCM2 1894 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 M0QYV0 167 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 CTNNB1P35222 781 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 BMPR1AP36894 532 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 GSCP56915 257 aaPredicted RBP18.11■□□□□ 0.49
UBE3D-203ENST00000369747 KRT17Q04695 432 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 ZNF844Q08AG5 666 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 PPP1R7Q15435 360 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 SPDYCQ5MJ68 293 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 LRRC38Q5VT99 294 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 KCTD16Q68DU8 428 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 KIAA1841Q6NSI8 718 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 VPS52Q8N1B4 723 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 SH2D3CQ8N5H7 860 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 B3GNT5Q9BYG0 378 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 RHOBTB2Q9BYZ6 727 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 TMBIM4Q9HC24 238 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 ALG13Q9NP73 1137 aaKnown RBP18.11■□□□□ 0.49
UBE3D-203ENST00000369747 KLHL11Q9NVR0 708 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 ATP8A1Q9Y2Q0 1164 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 REV3LO60673 3130 aa18.11■□□□□ 0.49
UBE3D-203ENST00000369747 SIGLEC16A6NMB1 481 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 GOLGA8SH3BPF8 625 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 ERBB2P04626 1255 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 RPL17P18621 184 aaKnown RBP18.1■□□□□ 0.49
UBE3D-203ENST00000369747 DNAJB2P25686 324 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 RFC1P35251 1148 aaPredicted RBP18.1■□□□□ 0.49
UBE3D-203ENST00000369747 ARHGAP17Q68EM7 881 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 ZNF280DQ6N043 979 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 ANKS3Q6ZW76 656 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 XYLT1Q86Y38 959 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 RCOR2Q8IZ40 523 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 JOSD2Q8TAC2 188 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 ART4Q93070 314 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 RNF25Q96BH1 459 aaPredicted RBP18.1■□□□□ 0.49
UBE3D-203ENST00000369747 SLITRK1Q96PX8 696 aa18.1■□□□□ 0.49
UBE3D-203ENST00000369747 PBX4Q9BYU1 374 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms