RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CNOT6LQ96LI5 555 aaKnown RBP10.99□□□□□ -0.65
CLRN3-201ENST00000368671 PNKPQ96T60 521 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 LSM14BQ9BX40 385 aaKnown RBP10.99□□□□□ -0.65
CLRN3-201ENST00000368671 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
CLRN3-201ENST00000368671 SMYD3Q9H7B4 428 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 ZDHHC4Q9NPG8 344 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 ATP8B3O60423 1300 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 SPAG17Q6Q759 2223 aa10.99□□□□□ -0.65
CLRN3-201ENST00000368671 THADAQ6YHU6 1953 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 PATE3B3GLJ2 98 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 COCHO43405 550 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ALDH1A2O94788 518 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 RTN3O95197 1032 aaPredicted RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 KAT7O95251 611 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ADH1CP00326 375 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 IRF1P10914 325 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ATICP31939 592 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 EHHADHQ08426 723 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 MESP2Q0VG99 397 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 CUL4BQ13620 913 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 CRY1Q16526 586 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 KNOP1Q1ED39 458 aaKnown RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ZNF699Q32M78 642 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ZNF667Q5HYK9 610 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 EMC10Q5UCC4 262 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 RHBDF2Q6PJF5 856 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 CYP2U1Q7Z449 544 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 PLEKHO2Q8TD55 490 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 RLN3Q8WXF3 142 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 KCNK16Q96T55 309 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 XYLT2Q9H1B5 865 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 POLMQ9NP87 494 aaPredicted RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 FAM13BQ9NYF5 915 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 BCCIPQ9P287 314 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 CHORDC1Q9UHD1 332 aaPredicted RBP10.98□□□□□ -0.65
CLRN3-201ENST00000368671 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
CLRN3-201ENST00000368671 NUP205Q92621 2012 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 E2F8A0AVK6 867 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 LNP1A1A4G5 178 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 LRRIQ3A6PVS8 624 aaPredicted RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 SGK1O00141 431 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 CLCN1P35523 988 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 EIF2DP41214 584 aaKnown RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 ME1P48163 572 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 NOVA1P51513 510 aaKnown RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 SLC5A3P53794 718 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 KCNC4Q03721 635 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 GAD2Q05329 585 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 ORC1Q13415 861 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 BMT2Q1RMZ1 405 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 EOGTQ5NDL2 527 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 LY6G5CQ5SRR4 150 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 HECTD3Q5T447 861 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 DAB2IPQ5VWQ8 1189 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 GRAMD1CQ8IYS0 662 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 PGBD3Q8N328 593 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 KIAA1958Q8N8K9 716 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 NAT16Q8N8M0 369 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 IL17RCQ8NAC3 791 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 SCAMP5Q8TAC9 235 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 OVCA2Q8WZ82 227 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 PIGKQ92643 395 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 NACA2Q9H009 215 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 CCSER2Q9H7U1 834 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 DMAP1Q9NPF5 467 aaPredicted RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 GMIPQ9P107 970 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
CLRN3-201ENST00000368671 CGNQ9P2M7 1197 aaKnown RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 TNRC6BQ9UPQ9 1833 aaKnown RBP10.97□□□□□ -0.65
CLRN3-201ENST00000368671 CEP250Q9BV73 2442 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 TCRBV21S2A2A0A5A6 115 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.96□□□□□ -0.65
CLRN3-201ENST00000368671 GIPC1O14908 333 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 AP1G2O75843 785 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 CCDC130P13994 396 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 P2RY2P41231 377 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 GRIA2P42262 883 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 KIR2DL1P43626 348 aaPredicted RBP10.96□□□□□ -0.65
CLRN3-201ENST00000368671 NCOA4Q13772 614 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 ANO4Q32M45 955 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 BTBD8Q5XKL5 378 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 PAQR9Q6ZVX9 377 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 ACOT1Q86TX2 421 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 FRMD1Q8N878 549 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 HMGB4Q8WW32 186 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms