RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PQLC3Q8N755 202 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 LINC01465Q8N7H1 131 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 GPATCH11Q8N954 259 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 PCDH19Q8TAB3 1148 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 FAXDC2Q96IV6 333 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 FETUBQ9UGM5 382 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 TEX264Q9Y6I9 313 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 ZNF200P98182 395 aaPredicted RBP18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 POU5F1BQ06416 359 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 GLRA4Q5JXX5 417 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 MAP7D3Q8IWC1 876 aa18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 UTP4Q969X6 686 aaKnown RBP18.85■□□□□ 0.61
UBQLN4-201ENST00000368309 A0A1B0GUA9 196 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 H3BRB1 525 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 LPXNO60711 386 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 APRTP07741 180 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 INHBAP08476 426 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 ATXN1P54253 815 aaKnown RBP18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 MAMDC4Q6UXC1 1216 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 LRRC6Q86X45 466 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 CCDC110Q8TBZ0 833 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 ZMAT2Q96NC0 199 aaKnown RBP18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 PHACTR1Q9C0D0 580 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 TUT1Q9H6E5 874 aaKnown RBP18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 NME7Q9Y5B8 376 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 GABBR2O75899 941 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 PYGBP11216 843 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 PPIL2Q13356 520 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 KHSRPQ92945 711 aaKnown RBP eCLIP18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 TRIM56Q9BRZ2 755 aaKnown RBP18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 C16orf70Q9BSU1 422 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 TXLNGQ9NUQ3 528 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 SNTG2Q9NY99 539 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 C2CD2Q9Y426 696 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
UBQLN4-201ENST00000368309 SDC4P31431 198 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 OLFML1Q6UWY5 402 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 PPM1NQ8N819 430 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 RFWD2Q8NHY2 731 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 FAM111AQ96PZ2 611 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 SNRNP25Q9BV90 132 aaKnown RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 MANSC1Q9H8J5 431 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 NUMBLQ9Y6R0 609 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 APOL1O14791 398 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 NPTXRO95502 500 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 NEFHP12036 1026 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 BOLA3Q53S33 107 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 TAF1BQ53T94 588 aaPredicted RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 FASTKD5Q7L8L6 764 aaKnown RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 MTDHQ86UE4 582 aaKnown RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 IFNLR1Q8IU57 520 aaPredicted RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 CLEC4CQ8WTT0 213 aa18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 SSU72Q9NP77 194 aaKnown RBP18.83■□□□□ 0.61
UBQLN4-201ENST00000368309 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 ZBED1O96006 694 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 T-ENOLP0DO92 83 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 ADORA2AP29274 412 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 NLRP9Q7RTR0 991 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 TTC17Q96AE7 1141 aa18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 C18orf25Q96B23 403 aaPredicted RBP18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 FAM49AQ9H0Q0 323 aaPredicted RBP18.83■□□□□ 0.6
UBQLN4-201ENST00000368309 A0A0G2JND7 137 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 PAPSS1O43252 624 aaPredicted RBP18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 DCTN3O75935 186 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 ANP32DO95626 131 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 OR6B3Q8NGW1 331 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 SLC44A1Q8WWI5 657 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 CYLDQ9NQC7 956 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 MCM8Q9UJA3 840 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 KIAA1257Q9ULG3 409 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 NR2E3Q9Y5X4 410 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 IQANK1A0A1B0GTG1 560 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 CXorf49A8MYA2 514 aaPredicted RBP18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 SMAPO00193 183 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 PDGFRBP09619 1106 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 GJA5P36382 358 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 SKIV2L2P42285 1042 aaKnown RBP18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 DPEP3Q9H4B8 488 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 RNF181Q9P0P0 153 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 PAK5Q9P286 719 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 TUBGCP4Q9UGJ1 667 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 YWHAZP63104 245 aaKnown RBP18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 SLC6A3Q01959 620 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 MARCH8Q5T0T0 291 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 FYB2Q5VWT5 728 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 PPTC7Q8NI37 304 aa18.82■□□□□ 0.6
UBQLN4-201ENST00000368309 TM9SF1O15321 606 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 ALADP13716 330 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 HDAC4P56524 1084 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 APOL6Q9BWW8 343 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 ZC3H7BQ9UGR2 993 aaKnown RBP18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 CENPFP49454 3210 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 CHADO15335 359 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 PDK2Q15119 407 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 GRIK4Q16099 956 aa18.81■□□□□ 0.6
UBQLN4-201ENST00000368309 CAND1Q86VP6 1230 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms