RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 SIX2Q9NPC8 291 aa16.27■□□□□ 0.2
PRKN-203ENST00000366894 TMEM51Q9NW97 253 aa16.27■□□□□ 0.2
PRKN-203ENST00000366894 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKN-203ENST00000366894 SCML2Q9UQR0 700 aa16.27■□□□□ 0.2
PRKN-203ENST00000366894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKN-203ENST00000366894 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.19
PRKN-203ENST00000366894 OBSL1O75147 1896 aa16.27■□□□□ 0.19
PRKN-203ENST00000366894 GREB1Q4ZG55 1949 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 RNF225M0QZC1 329 aaPredicted RBP16.26■□□□□ 0.19
PRKN-203ENST00000366894 TNFRSF10BO14763 440 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 ABL1P00519 1130 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 HDCP19113 662 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 PFKPQ01813 784 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 ARID3BQ8IVW6 561 aaPredicted RBP16.26■□□□□ 0.19
PRKN-203ENST00000366894 YAF2Q8IY57 180 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 SIX6OS1Q8N1H7 587 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 CELF5Q8N6W0 485 aaKnown RBP16.26■□□□□ 0.19
PRKN-203ENST00000366894 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 KAT5Q92993 513 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 LRRC3BQ96PB8 259 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 NAA15Q9BXJ9 866 aaKnown RBP16.26■□□□□ 0.19
PRKN-203ENST00000366894 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 NACA2Q9H009 215 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 CNGB3Q9NQW8 809 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 PCDHGC3Q9UN70 934 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 SIK3Q9Y2K2 1263 aa16.26■□□□□ 0.19
PRKN-203ENST00000366894 COL4A2P08572 1712 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 NUP210Q8TEM1 1887 aaPredicted RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 FAM92AA1XBS5 289 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 M0QYV0 167 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 CYP26A1O43174 497 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 SOX5P35711 763 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 KIF11P52732 1056 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 IFRD2Q12894 506 aaPredicted RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 GRM2Q14416 872 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 FIGNQ5HY92 759 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 HECTD3Q5T447 861 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 APTXQ7Z2E3 356 aaKnown RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 CCDC186Q7Z3E2 898 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 CMTM8Q8IZV2 173 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 SCML4Q8N228 414 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 TMEM35BQ8NCS4 154 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 SLC35F5Q8WV83 523 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 ARHGEF3Q9NR81 526 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
PRKN-203ENST00000366894 EP300Q09472 2414 aaPredicted RBP16.25■□□□□ 0.19
PRKN-203ENST00000366894 DMXL1Q9Y485 3027 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 ZNF840PA6NDX5 716 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 SHISA7A6NL88 538 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 HEPACAM2A8MVW5 462 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 F8VZ95 297 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 ZBED1O96006 694 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 FERP16591 822 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 PSMC3P17980 439 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 ATP5C1P36542 298 aaKnown RBP16.24■□□□□ 0.19
PRKN-203ENST00000366894 USP46P62068 366 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 PLCB2Q00722 1185 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 PDE4CQ08493 712 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 CC2D1AQ6P1N0 951 aaPredicted RBP16.24■□□□□ 0.19
PRKN-203ENST00000366894 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 TRIM72Q6ZMU5 477 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 PIGZQ86VD9 579 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 MAB21L3Q8N8X9 362 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 IRGQQ8WZA9 623 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 IRF7Q92985 503 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 SEMA4AQ9H3S1 761 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 NLRC4Q9NPP4 1024 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 OLA1Q9NTK5 396 aaKnown RBP16.24■□□□□ 0.19
PRKN-203ENST00000366894 TDP1Q9NUW8 608 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 CHORDC1Q9UHD1 332 aaPredicted RBP16.24■□□□□ 0.19
PRKN-203ENST00000366894 BZW2Q9Y6E2 419 aaKnown RBP16.24■□□□□ 0.19
PRKN-203ENST00000366894 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
PRKN-203ENST00000366894 ARNTLO00327 626 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 BEST1O76090 585 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 LSM8O95777 96 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 CKMP06732 381 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 CYP11B1P15538 503 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 CLCN1P35523 988 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TKTL1P51854 596 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 AMPD2Q01433 879 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TRIM14Q14142 442 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 RAB41Q5JT25 222 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TXNDC8Q6A555 127 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 PM20D1Q6GTS8 502 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 KLHDC10Q6PID8 442 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 C1orf228Q6PIY5 440 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 ZDHHC17Q8IUH5 632 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 ZMIZ2Q8NF64 920 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms