RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 CFHR1Q03591 330 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MZT2AQ6P582 158 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZNF793Q6ZN11 406 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 B4GALNT4Q76KP1 1039 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TRAPPC11Q7Z392 1133 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZBTB46Q86UZ6 589 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FOXP4Q8IVH2 680 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 KRT78Q8N1N4 520 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MPP5Q8N3R9 675 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LINC01465Q8N7H1 131 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 C12orf76Q8N812 135 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FAM71DQ8N9W8 422 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MAFAQ8NHW3 353 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZCRB1Q8TBF4 217 aaKnown RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CHMP4CQ96CF2 233 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CTAGE1Q96RT6 745 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZPBPQ9BS86 351 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 NTPCRQ9BSD7 190 aaKnown RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CINPQ9BW66 212 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZNF518BQ9C0D4 1074 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CCDC8Q9H0W5 538 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 A1CFQ9NQ94 594 aaKnown RBP2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TMEM184CQ9NVA4 438 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CPA4Q9UI42 421 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ANKRD6Q9Y2G4 727 aa2.22□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TNKSO95271 1327 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 A0A088AWK7 358 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 LOC102723971A0A1B0GUV8 181 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 F8W810 466 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 BTN3A1O00481 513 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ACOT8O14734 319 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PRPF4O43172 522 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SNX2O60749 519 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RASAL1O95294 804 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 APEHP13798 732 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HOXD9P28356 352 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DIO1P49895 249 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TIRAPP58753 221 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 NANOS2P60321 138 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TXNL4AP83876 142 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLC13A2Q13183 592 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MTX1Q13505 466 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ODF1Q14990 250 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ASIC2Q16515 512 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 UBAP2Q5T6F2 1119 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZNF549Q6P9A3 640 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 Q6ZTC4 211 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PIP4P1Q86T03 277 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZNF280BQ86YH2 543 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 UEVLDQ8IX04 471 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PNPLA1Q8N8W4 532 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PRPF38AQ8NAV1 312 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 IPCEF1Q8WWN9 437 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HPS3Q969F9 1004 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TRIM5Q9C035 493 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLCO5A1Q9H2Y9 848 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FAM83DQ9H4H8 585 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MLXIPQ9HAP2 919 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GBA2Q9HCG7 927 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TCF7L1Q9HCS4 588 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SEMA4BQ9NPR2 832 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ARL8BQ9NVJ2 186 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 STEAP1Q9UHE8 339 aa2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 LUC7L2Q9Y383 392 aaKnown RBP2.21□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SPATA31A1Q5TZJ5 1347 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 AQP7P3A6NL99 342 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TTC34A8MYJ7 566 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CLIC1O00299 241 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SPTLC2O15270 562 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SRGAP2O75044 1071 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HSPA6P17066 643 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ADRA1DP25100 572 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 KLRC1P26715 233 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 UQCRC1P31930 480 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 THBS4P35443 961 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GATMP50440 423 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RAB1AP62820 205 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZXDBP98169 803 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PSG6Q00889 435 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RHDQ02161 417 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FAM50AQ14320 339 aaKnown RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MFSD13AQ14CX5 517 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 LY6KQ17RY6 165 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CACHD1Q5VU97 1274 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DPY19L3Q6ZPD9 716 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 USP43Q70EL4 1123 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FAM57BQ71RH2 274 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GRAMD1CQ8IYS0 662 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLC44A5Q8NCS7 719 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TMEM171Q8WVE6 324 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PMM1Q92871 262 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SPSB4Q96A44 273 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CGRRF1Q99675 332 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SMAD5Q99717 465 aaKnown RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SF3B5Q9BWJ5 86 aaKnown RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FAM126AQ9BYI3 521 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TRIM54Q9BYV2 358 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GTPBP4Q9BZE4 634 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms