RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 RAG1P15918 1043 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 C16orf89Q6UX73 402 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 DNAJC19Q96DA6 116 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 TASP1Q9H6P5 420 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 CRLS1Q9UJA2 301 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 RAD54BQ9Y620 910 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 AHDC1Q5TGY3 1603 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ITGALP20701 1170 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 YWHAQP27348 245 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 AVPR1AP37288 418 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 AIF1P55008 147 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SLC47A2Q86VL8 602 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 LRRC6Q86X45 466 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 DDIASQ8IXT1 998 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 VPS26AO75436 327 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 TRPA1O75762 1119 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 GNRH1P01148 92 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 KRT4P19013 534 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 NPY2RP49146 381 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 HIST2H2ACQ16777 129 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 EPC2Q52LR7 807 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 HIST2H2AA3Q6FI13 130 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SYTL2Q9HCH5 934 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SLC12A8A0AV02 714 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ASMTLO95671 621 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ASS1P00966 412 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 VCLP18206 1134 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 PCYOX1LQ8NBM8 494 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ABTB1Q969K4 478 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ABCC13Q9NSE7 274 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 HEATR9A2RTY3 570 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ANGPT2O15123 496 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 KLRC4O43908 158 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 CAPN15O75808 1086 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 YY1P25490 414 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 TBX4P57082 545 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 SMTNL2Q2TAL5 461 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
COL4A5-202ENST00000361603 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
COL4A5-202ENST00000361603 PLEKP08567 350 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 PPM1AP35813 382 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 CLASP2O75122 1294 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 MICAL2O94851 1124 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 FGF19O95750 216 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 TSHRP16473 764 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 INPP5AQ14642 412 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 TOP6BLQ8N6T0 577 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 C9orf72Q96LT7 481 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 CCDC138Q96M89 665 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 KCNK16Q96T55 309 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 CDYLQ9Y232 598 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 SIK3Q9Y2K2 1263 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 A0A087X0B3 334 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 NCANO14594 1321 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 ARHGAP10A1A4S6 786 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 CKMP06732 381 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 RBP1P09455 135 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 CHN1P15882 459 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 TRMT6Q9UJA5 497 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 SYCE1LA8MT33 242 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 RHOBTB1O94844 696 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 MAPK1P28482 360 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 GYS2P54840 703 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 GRIK3Q13003 919 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 ARHGEF19Q8IW93 802 aa11.8□□□□□ -0.52
COL4A5-202ENST00000361603 POP1Q99575 1024 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
COL4A5-202ENST00000361603 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms