RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 E7ENQ6 273 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 DHX15O43143 795 aaKnown RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 ADCY3O60266 1144 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 NPTXRO95502 500 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 WEE2P0C1S8 567 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 ATICP31939 592 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 HSD17B4P51659 736 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 GDF10P55107 478 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 ZNF200P98182 395 aaPredicted RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 CRHR2Q13324 411 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 FNBP1LQ5T0N5 605 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 CLPTM1LQ96KA5 538 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 TMEM8AQ9HCN3 771 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 KRT82Q9NSB4 513 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 A0A0G2JLL6 359 aaPredicted RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 TCRBV7S3A2A0A539 114 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 TNNC2P02585 160 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 GLRA2P23416 452 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 MAN1A1P33908 653 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 ACAP1Q15027 740 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 PRRT2Q7Z6L0 340 aaPredicted RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 C12orf56Q8IXR9 622 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 RPF1Q9H9Y2 349 aaKnown RBP9.47□□□□□ -0.89
TOP1-201ENST00000361337 CYP4F11Q9HBI6 524 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 GINM1Q9NU53 330 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 TAS2R1Q9NYW7 299 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 COQ4Q9Y3A0 265 aa9.47□□□□□ -0.89
TOP1-201ENST00000361337 F8VP50 259 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 LSM1O15116 133 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 NOL3O60936 208 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 TROVE2P10155 538 aaKnown RBP eCLIP9.46□□□□□ -0.89
TOP1-201ENST00000361337 KITP10721 976 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 VHLP40337 213 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 CCNFP41002 786 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 DYNLT1P63172 113 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ZNF252P-AS1Q0IIN9 211 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ALCAMQ13740 583 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 CYTH1Q15438 398 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 DCUN1D2Q6PH85 259 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 LRRC74BQ6ZQY2 392 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 RHOT1Q8IXI2 618 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 CAPNS2Q96L46 248 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 NDNQ99608 321 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 BTBD10Q9BSF8 475 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 MRGBPQ9NV56 204 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 WDR35Q9P2L0 1181 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 LNPEPQ9UIQ6 1025 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 SMG5Q9UPR3 1016 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 RBMX2Q9Y388 322 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 PTPRJQ12913 1337 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ANKRD33BA6NCL7 494 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 RNASEH2BQ5TBB1 312 aaKnown RBP9.46□□□□□ -0.89
TOP1-201ENST00000361337 TLK2Q86UE8 772 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 SLC25A41Q8N5S1 370 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 TMEM161BQ8NDZ6 487 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 ARHGEF4Q9NR80 690 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 TBX20Q9UMR3 447 aa9.46□□□□□ -0.89
TOP1-201ENST00000361337 CEP350Q5VT06 3117 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 B4GALT5O43286 388 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 HAUS5O94927 633 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 SLC1A1P43005 524 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 TMED10P49755 219 aaKnown RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 OGDHQ02218 1023 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 KDSRQ06136 332 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 SREBF2Q12772 1141 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 THOC5Q13769 683 aaKnown RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 DGKDQ16760 1214 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 ANO4Q32M45 955 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 RASSF3Q86WH2 238 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 TDRPQ86YL5 185 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 KATNAL2Q8IYT4 538 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 RIBC1Q8N443 379 aaPredicted RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 ALLCQ8N6M5 410 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 HASPINQ8TF76 798 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 ANKRD27Q96NW4 1050 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 PREBQ9HCU5 417 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
TOP1-201ENST00000361337 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.9
TOP1-201ENST00000361337 FAM237BA0A1B0GVD1 139 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MANSC4A6NHS7 340 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 ALOX15BO15296 676 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MAFGO15525 162 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 RTN3O95197 1032 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 PSMG1O95456 288 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 AKAP5P24588 427 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms