RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 COLGALT1Q8NBJ5 622 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 TBCBQ99426 244 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 RNF19AQ9NV58 838 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 RBL1P28749 1068 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 RPA3P35244 121 aaPredicted RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 BST2Q10589 180 aaKnown RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 ULK4Q96C45 1275 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 MRPL1Q9BYD6 325 aaKnown RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 EML4Q9HC35 981 aaKnown RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 OPLAHO14841 1288 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 FANCGO15287 622 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 CALB2P22676 271 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 AMPD1P23109 780 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 DPYSL3Q14195 570 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 TEDDM1Q5T9Z0 273 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 TAS2R42Q7RTR8 314 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 COPS5Q92905 334 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 SRPK1Q96SB4 655 aaKnown RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 ILKAPQ9H0C8 392 aaPredicted RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 LRRC40Q9H9A6 602 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 ADARB2Q9NS39 739 aaKnown RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 COL20A1Q9P218 1284 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 RIPK3Q9Y572 518 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 SIGLEC16A6NMB1 481 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 DCDC2CA8MYV0 355 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 PLA2G6O60733 806 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 HMGCRP04035 888 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 AKAP5P24588 427 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 GLRBP48167 497 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 KBTBD12Q3ZCT8 623 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 LRRC38Q5VT99 294 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 CEP70Q8NHQ1 597 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 MRPL46Q9H2W6 279 aaKnown RBP16.89■□□□□ 0.3
SCAF1-201ENST00000360565 UBP1Q9NZI7 540 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 AURKCQ9UQB9 309 aa16.89■□□□□ 0.3
SCAF1-201ENST00000360565 UBTFL6P0CB48 400 aaPredicted RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 PHF13Q86YI8 300 aaPredicted RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 SUGP1Q8IWZ8 645 aaKnown RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 R3HDM2Q9Y2K5 976 aaKnown RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 KCNK1O00180 336 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 CYTH1Q15438 398 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 QPCTQ16769 361 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 KCNT2Q6UVM3 1135 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 IFNEQ86WN2 208 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 NCLNQ969V3 563 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 EGFL8Q99944 293 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 HAUS8Q9BT25 410 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 CATSPERBQ9H7T0 1116 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 SETSIPP0DME0 302 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 ACAT1P24752 427 aaKnown RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 STRA8Q7Z7C7 330 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 GIPC2Q8TF65 315 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 BSNDQ8WZ55 320 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 MYLK2Q9H1R3 596 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 KRT82Q9NSB4 513 aa16.89■□□□□ 0.29
SCAF1-201ENST00000360565 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
SCAF1-201ENST00000360565 NKRFO15226 690 aaKnown RBP eCLIP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 RALBP11234 206 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SERPINB3P29508 390 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 RPL22P35268 128 aaKnown RBP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 MAP3K7CLP57077 242 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SATB1Q01826 763 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 MTFR1Q15390 333 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SIX2Q9NPC8 291 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 NSMCE4AQ9NXX6 385 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 CDYLQ9Y232 598 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 YDJCA8MPS7 323 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 TADA2AO75478 443 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 BANF1O75531 89 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 NFICP08651 508 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 YY1P25490 414 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 MMP13P45452 471 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 LENG9Q96B70 501 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 PRG3Q9Y2Y8 225 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 PPME1Q9Y570 386 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SPATA31C2B4DYI2 1134 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 FCHO1O14526 889 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 RTP1P59025 263 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 PDCD2Q16342 344 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SCUBE1Q8IWY4 988 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 OPTNQ96CV9 577 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 TSPAN17Q96FV3 270 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 MBOAT7Q96N66 472 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 SLCO1B3Q9NPD5 702 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 ARMCX1Q9P291 453 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 GGA2Q9UJY4 613 aa16.88■□□□□ 0.29
SCAF1-201ENST00000360565 DRG1Q9Y295 367 aaKnown RBP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 TIMM13Q9Y5L4 95 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-201ENST00000360565 E2F6O75461 281 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms