RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TTC19Q6DKK2 380 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 OLFML1Q6UWY5 402 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ZDHHC24Q6UX98 284 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 NPNTQ6UXI9 565 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DSTYKQ6XUX3 929 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SPOCD1Q6ZMY3 1216 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 HFE2Q6ZVN8 426 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PAQR9Q6ZVX9 377 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MAATS1Q7Z4T9 603 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TAX1BP1Q86VP1 789 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 FUKQ8N0W3 1084 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SH2D3CQ8N5H7 860 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 B3GALNT2Q8NCR0 500 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ADAM32Q8TC27 787 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SLC35F5Q8WV83 523 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 UBLCP1Q8WVY7 318 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ARL8AQ96BM9 186 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MCRS1Q96EZ8 462 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SCLYQ96I15 445 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ZNF560Q96MR9 790 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DEFB118Q96PH6 123 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 NAP1L3Q99457 506 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SLX1AQ9BQ83 275 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ERP44Q9BS26 406 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CALN1Q9BXU9 219 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DCLK3Q9C098 648 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ZNF518BQ9C0D4 1074 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 RSAD1Q9HA92 442 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 HMX1Q9NP08 348 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DDX43Q9NXZ2 648 aaKnown RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 HESX1Q9UBX0 185 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ASIC3Q9UHC3 531 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DNPEPQ9ULA0 475 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MTUS1Q9ULD2 1270 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ATP8A1Q9Y2Q0 1164 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 C3orf70A6NLC5 250 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SMIM23A6NLE4 172 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PSTPIP1O43586 416 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 FKTNO75072 461 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 RNF40O75150 1001 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PTPN1P18031 435 aaKnown RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 HSD17B3P37058 310 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SESN3P58005 492 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PLCB3Q01970 1234 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ADIGQ0VDE8 80 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 KLF1Q13351 362 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PIGHQ14442 188 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ZNF268Q14587 947 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PCBP1Q15365 356 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SV2CQ496J9 727 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CYP4V2Q6ZWL3 525 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 KATNAL2Q8IYT4 538 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 KCTD6Q8NC69 237 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 FAM172AQ8WUF8 416 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 FAM149B1Q96BN6 582 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PLEKHG4BQ96PX9 1271 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TMEM121Q9BTD3 319 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 UBXN6Q9BZV1 441 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 KRT82Q9NSB4 513 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TMLHEQ9NVH6 421 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DNAJB4Q9UDY4 337 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 STRIP2Q9ULQ0 834 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 USP18Q9UMW8 372 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PRG3Q9Y2Y8 225 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 NR2E3Q9Y5X4 410 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MYO7AQ13402 2215 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 hCG_1818297A0A087WSY0 165 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 A0A0U1RQF3 1178 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 GOLGA8CPA6NN73 597 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 F5H423 210 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-202ENST00000359366 DPYSL4O14531 572 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CST8O60676 142 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 DDHD2O94830 711 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 ECEL1O95672 775 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 STAU1O95793 577 aaKnown RBP5.31□□□□□ -1.56
ATXN3-202ENST00000359366 IFNB1P01574 187 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 GPD1P21695 349 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CHRNA3P32297 505 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CHKAP35790 457 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CDKN2BP42772 138 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 GABRB2P47870 512 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CCL23P55773 120 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 PTK7Q13308 1070 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 DSC3Q14574 896 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 UPP1Q16831 310 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 PPP6R3Q5H9R7 873 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-202ENST00000359366 CLLU1OSQ5K130 101 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 MFSD4BQ5TF39 518 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 HHATQ5VTY9 493 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 GSTA5Q7RTV2 222 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 TMCO2Q7Z6W1 182 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-202ENST00000359366 PIGZQ86VD9 579 aa5.31□□□□□ -1.56
ATXN3-202ENST00000359366 ECHDC2Q86YB7 292 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms