RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KCTD14Q9BQ13 255 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 NFKBIZQ9BYH8 718 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 UTP6Q9NYH9 597 aaKnown RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 ATP6AP1LQ52LC2 224 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 USP13Q92995 863 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 TMEM120AQ9BXJ8 343 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 HPS5Q9UPZ3 1129 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 KLHL20Q9Y2M5 609 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 MGAT4DA6NG13 374 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 HPGDP15428 266 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 GUCA1AP43080 201 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 EFEMP1Q12805 493 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 POP1Q99575 1024 aaKnown RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 AAASQ9NRG9 546 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 PLA2G6O60733 806 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 CYP2C8P10632 490 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 TRAF2Q12933 501 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 TFDP3Q5H9I0 405 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 PDPK2PQ6A1A2 396 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 DDHD1Q8NEL9 900 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 UNC13BO14795 1591 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 KLHL41O60662 606 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 NQO1P15559 274 aaKnown RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 VCLP18206 1134 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 PSMD7P51665 324 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 MRPS35P82673 323 aaKnown RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 OTUD4Q01804 1114 aaKnown RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 CSHL1Q14406 222 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 NFIL3Q16649 462 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 MED8Q96G25 268 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 CTNNAL1Q9UBT7 734 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FAM47E-STBD1D6RA91 191 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 GPR182O15218 404 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 STIP1P31948 543 aaKnown RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 HALP42357 657 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FCGRTP55899 365 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 SEL1L3Q68CR1 1132 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 CCDC126Q96EE4 140 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 CLPBQ9H078 707 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 EFCAB1Q9HAE3 211 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FAM25AB3EWG3 89 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FAM25CB3EWG5 89 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FAM25GB3EWG6 89 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 EIF2S1P05198 315 aaKnown RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 SARSP49591 514 aaKnown RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 AQP5P55064 265 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 ANKRD7Q92527 254 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 ABCB1P08183 1280 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 TMEM132BQ14DG7 1078 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 PACSIN1Q9BY11 444 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 FOXN3O00409 490 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 ACADSP16219 412 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 MAPK7Q13164 816 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 KDM7AQ6ZMT4 941 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 PTAR1Q7Z6K3 402 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 ZKSCAN4Q969J2 545 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-202ENST00000359082 GPRASP2Q96D09 838 aa18.94■□□□□ 0.62
SHANK1-202ENST00000359082 ZC3H11AO75152 810 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 NFICP08651 508 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ZCCHC18P0CG32 403 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 BGNP21810 368 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 RABL6Q3YEC7 729 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 DDI1Q8WTU0 396 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 FRMD8P1Q9BZ68 369 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 NT5MQ9NPB1 228 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 PDGFCQ9NRA1 345 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ITGB6P18564 788 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 WEE1P30291 646 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ITIH4Q14624 930 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 PDK2Q15119 407 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 TMEM121Q9BTD3 319 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 OSGEPL1Q9H4B0 414 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 DYRK3O43781 588 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 CSNK2BP67870 215 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ZNF284Q2VY69 593 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ACOX2Q99424 681 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 VPS28Q9UK41 221 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 VDRP11473 427 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 HNRNPH1P31943 449 aaKnown RBP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 KCNMA1Q12791 1236 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 GRB10Q13322 594 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 STARD3Q14849 445 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 NCF4Q15080 339 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 ZCWPW2Q504Y3 356 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 FRMD8Q9BZ67 464 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 UBP1Q9NZI7 540 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 POLR1AO95602 1720 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-202ENST00000359082 EGFRP00533 1210 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 MUTP22033 750 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 CCNG1P51959 295 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 MPZL3Q6UWV2 235 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 CBWD2Q8IUF1 395 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
SHANK1-202ENST00000359082 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 RHOCP08134 193 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms