RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IQCGQ9H095 443 aaKnown RBP20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PDZD7Q9H5P4 517 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PPCSQ9HAB8 311 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ZBED1O96006 694 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ATXN1P54253 815 aaKnown RBP20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PMF1Q6P1K2 205 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PLD5Q8N7P1 536 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 C7orf31Q8N865 590 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 FAM172AQ8WUF8 416 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 TRIM55Q9BYV6 548 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PRMT7Q9NVM4 692 aaPredicted RBP20.37■□□□□ 0.85
COL13A1-201ENST00000354547 DPP3Q9NY33 737 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ATP5HO75947 161 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 TFE3P19532 575 aaPredicted RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 SERPINB3P29508 390 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 STIP1P31948 543 aaKnown RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 TMEM62Q0P6H9 643 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 PPP1R26Q5T8A7 1209 aaPredicted RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 CDHR3Q6ZTQ4 885 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 KIF12Q96FN5 646 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 NUDCD1Q96RS6 583 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 FRMD8P1Q9BZ68 369 aaPredicted RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 CYLDQ9NQC7 956 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 BARX2Q9UMQ3 279 aaPredicted RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 TEX264Q9Y6I9 313 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 HCRTO43612 131 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 C22orf31O95567 290 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 P4HA1P13674 534 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 TFDP2Q14188 446 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 CCDC14Q49A88 953 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 TRIM68Q6AZZ1 485 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 RBPJLQ9UBG7 517 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 ZC3H7BQ9UGR2 993 aaKnown RBP20.36■□□□□ 0.85
COL13A1-201ENST00000354547 SNX9Q9Y5X1 595 aa20.36■□□□□ 0.85
COL13A1-201ENST00000354547 C2CD2LO14523 706 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 TM9SF1O15321 606 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ARFIP2P53365 341 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 SESN3P58005 492 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 KCNJ11Q14654 390 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ANKRD20A2Q5SQ80 823 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ANKRD20A1Q5TYW2 823 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ANKRD20A3Q5VUR7 823 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 FAM167BQ9BTA0 163 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 USP29Q9HBJ7 922 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
COL13A1-201ENST00000354547 IRX4P78413 519 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 RASA2Q15283 850 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 TTC7BQ86TV6 843 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 EXOC8Q8IYI6 725 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 CXorf38Q8TB03 319 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 SLC44A1Q8WWI5 657 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ZNF395Q9H8N7 513 aaPredicted RBP20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ARL8BQ9NVJ2 186 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 PIH1D1Q9NWS0 290 aaKnown RBP20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ERAP1Q9NZ08 941 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 COPEO14579 308 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 PPEF2O14830 753 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 KITP10721 976 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 IL4RP24394 825 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 GABRB2P47870 512 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 YWHAZP63104 245 aaKnown RBP20.35■□□□□ 0.85
COL13A1-201ENST00000354547 SLC45A4Q5BKX6 768 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 GLRA4Q5JXX5 417 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 CCDC62Q6P9F0 684 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 RFWD3Q6PCD5 774 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 NT5C1AQ9BXI3 368 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 TMEM120AQ9BXJ8 343 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 VPS11Q9H270 941 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 ARMCX1Q9P291 453 aa20.35■□□□□ 0.85
COL13A1-201ENST00000354547 APOL1O14791 398 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 PCK1P35558 622 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 ERFP50548 548 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 PCDH19Q8TAB3 1148 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 MRPL45Q9BRJ2 306 aaKnown RBP20.34■□□□□ 0.85
COL13A1-201ENST00000354547 MARCOQ9UEW3 520 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-201ENST00000354547 FAM237BA0A1B0GVD1 139 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 SKAP2O75563 359 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-201ENST00000354547 PFKMP08237 780 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 RASSF2P50749 326 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 PQLC3Q8N755 202 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 ARMC2Q8NEN0 867 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 CLEC4CQ8WTT0 213 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 APOPT1Q96IL0 206 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 SRPK1Q96SB4 655 aaKnown RBP20.34■□□□□ 0.85
COL13A1-201ENST00000354547 SNRNP25Q9BV90 132 aaKnown RBP20.34■□□□□ 0.85
COL13A1-201ENST00000354547 ANK1P16157 1881 aa20.34■□□□□ 0.85
COL13A1-201ENST00000354547 CYB561D2O14569 222 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 HAUS5O94927 633 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 SDC4P31431 198 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 CPA2P48052 419 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 PARP6Q2NL67 630 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 MDH1BQ5I0G3 518 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 RFX8Q6ZV50 586 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 ALKBH8Q96BT7 664 aaKnown RBP20.33■□□□□ 0.85
COL13A1-201ENST00000354547 ACAP3Q96P50 834 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 DENND2DQ9H6A0 471 aaPredicted RBP20.33■□□□□ 0.85
COL13A1-201ENST00000354547 SSU72Q9NP77 194 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms