RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NEK11Q8NG66 645 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 TNIP3Q96KP6 325 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 SLITRK1Q96PX8 696 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 CYP2S1Q96SQ9 504 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 ZNHIT6Q9NWK9 470 aaKnown RBP12.21□□□□□ -0.46
CDRT1-202ENST00000354433 ZSCAN32Q9NX65 697 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 DAAM1Q9Y4D1 1078 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 F5P12259 2224 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 TRIM49P0CI25 452 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 TRIM49CP0CI26 452 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 TNNT1P13805 278 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 ARSAP15289 507 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 HDCP19113 662 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 CXCL12P48061 93 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 VAMP7P51809 220 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 USP46P62068 366 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 AMPD2Q01433 879 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 SATB1Q01826 763 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 ENPEPQ07075 957 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-202ENST00000354433 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 ZACNQ401N2 412 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 DGKKQ5KSL6 1271 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
CDRT1-202ENST00000354433 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 REXO1L1PQ8IX06 675 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 CPA6Q8N4T0 437 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 SYN2Q92777 582 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-202ENST00000354433 C8orf48Q96LL4 319 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 CEP295NLQ96MC4 621 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 C16orf45Q96MC5 204 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-202ENST00000354433 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 FAM83CQ9BQN1 747 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 PLCB1Q9NQ66 1216 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 HPS4Q9NQG7 708 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 DUS2Q9NX74 493 aaKnown RBP12.2□□□□□ -0.46
CDRT1-202ENST00000354433 NCDNQ9UBB6 729 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 WNT6Q9Y6F9 365 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 PATJQ8NI35 1801 aa12.2□□□□□ -0.46
CDRT1-202ENST00000354433 SOWAHDA6NJG2 315 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 VNN1O95497 513 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 KLK7P49862 253 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 NRLP54845 237 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 NOP14P78316 857 aaKnown RBP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 CLDN10P78369 228 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 USP4Q13107 963 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 ORC1Q13415 861 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 GAS6Q14393 721 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 ZNF77Q15935 545 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 RAD9BQ6WBX8 426 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 FAM35AQ86V20 835 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 SH3RF2Q8TEC5 729 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 OSCP1Q8WVF1 389 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 RUBCNQ92622 972 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 FAM126AQ9BYI3 521 aaPredicted RBP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 TRMT1Q9NXH9 659 aaKnown RBP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 CACNA1IQ9P0X4 2223 aa12.19□□□□□ -0.46
CDRT1-202ENST00000354433 PTPRZ1P23471 2315 aaPredicted RBP12.19□□□□□ -0.46
CDRT1-202ENST00000354433 HLA-DRAP01903 254 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 GCLMP48507 274 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 TAF10Q12962 218 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 CCINQ13939 588 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 GBP6Q6ZN66 633 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 KIAA2013Q8IYS2 634 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 SPEM1Q8N4L4 309 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 ZBTB44Q8NCP5 570 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 TAF4BQ92750 862 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 SECISBP2LQ93073 1101 aaKnown RBP12.18□□□□□ -0.46
CDRT1-202ENST00000354433 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 FBXO32Q969P5 355 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 TTLL2Q9BWV7 592 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 B3GNT5Q9BYG0 378 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 SDCBP2Q9H190 292 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-202ENST00000354433 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-202ENST00000354433 SMPD4Q9NXE4 827 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 RAB23Q9ULC3 237 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 MYO6Q9UM54 1294 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 ARHGAP26Q9UNA1 814 aa12.18□□□□□ -0.46
CDRT1-202ENST00000354433 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-202ENST00000354433 RIF1Q5UIP0 2472 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms