RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 XYLT1Q86Y38 959 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 WNT8BQ93098 351 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 TGS1Q96RS0 853 aaKnown RBP19.45■□□□□ 0.7
SPNS1-204ENST00000352260 STARD13Q9Y3M8 1113 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 CENPFP49454 3210 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 SIGLEC16A6NMB1 481 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 F8VP50 259 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 DCTN3O75935 186 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 CD4P01730 458 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 TCF4P15884 667 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 CCND3P30281 292 aaPredicted RBP19.45■□□□□ 0.7
SPNS1-204ENST00000352260 CALCOCO2Q13137 446 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 LCLAT1Q6UWP7 414 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 NIPA2Q8N8Q9 360 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 EXD1Q8NHP7 514 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 UBA3Q8TBC4 463 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 TEKT4Q8WW24 435 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 MAIP1Q8WWC4 291 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 ITFG2Q969R8 447 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 TSPAN18Q96SJ8 248 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 FAM167BQ9BTA0 163 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 LRRC19Q9H756 370 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 WDR35Q9P2L0 1181 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 NME7Q9Y5B8 376 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 M0QZ92 97 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 PIRO00625 290 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 ATF7P17544 494 aaPredicted RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 STX2P32856 288 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 GABRB2P47870 512 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 CAV1Q03135 178 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 PIGHQ14442 188 aaPredicted RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 FAM47CQ5HY64 1035 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 TWF2Q6IBS0 349 aaKnown RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 SESTD1Q86VW0 696 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 DRAXINQ8NBI3 349 aaPredicted RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 ARRDC4Q8NCT1 418 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 JOSD2Q8TAC2 188 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 ZNF296Q8WUU4 475 aaPredicted RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 UTP4Q969X6 686 aaKnown RBP19.44■□□□□ 0.7
SPNS1-204ENST00000352260 DTNBP1Q96EV8 351 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 SYNCQ9H7C4 482 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 XPNPEP3Q9NQH7 507 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.44■□□□□ 0.73e-6■■■□□ 15
SPNS1-204ENST00000352260 NKIRAS1Q9NYS0 192 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 TSPAN16Q9UKR8 245 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 USH1CQ9Y6N9 552 aa19.44■□□□□ 0.7
SPNS1-204ENST00000352260 XPOTO43592 962 aaKnown RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 AP1G2O75843 785 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 KRT3P12035 628 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RFC1P35251 1148 aaPredicted RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 SLCO1A2P46721 670 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RGS9BPQ6ZS82 235 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 SYDE1Q6ZW31 735 aaPredicted RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 ECHDC2Q86YB7 292 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 C12orf29Q8N999 325 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 C1orf54Q8WWF1 131 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RMDN2Q96LZ7 410 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RALAP11233 206 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 CDC25CP30307 473 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 KCNJ1P48048 391 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 SOX4Q06945 474 aaPredicted RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 DYNC1I2Q13409 638 aaKnown RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 STILQ15468 1287 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 ZRSR2Q15696 482 aaKnown RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 GOLGA7BQ2TAP0 167 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 LRRC38Q5VT99 294 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 CCDC105Q8IYK2 499 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 RIBC1Q8N443 379 aaPredicted RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 DNAJC9Q8WXX5 260 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 MCRS1Q96EZ8 462 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 SENP6Q9GZR1 1112 aaPredicted RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 DCLRE1BQ9H816 532 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 METTL5Q9NRN9 209 aaKnown RBP19.43■□□□□ 0.7
SPNS1-204ENST00000352260 KLHL11Q9NVR0 708 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 GGT7Q9UJ14 662 aa19.43■□□□□ 0.7
SPNS1-204ENST00000352260 HTTP42858 3142 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 PFKMP08237 780 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 CTSHP09668 335 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 ELNP15502 786 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 PSMA2P25787 234 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 SLC18A1P54219 525 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 IL9RQ01113 521 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 SP3Q02447 781 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 KLF1Q13351 362 aaPredicted RBP19.42■□□□□ 0.7
SPNS1-204ENST00000352260 SOWAHAQ2M3V2 549 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 FBXO47Q5MNV8 452 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 COL13A1Q5TAT6 717 aaPredicted RBP19.42■□□□□ 0.7
SPNS1-204ENST00000352260 ANKS1BQ7Z6G8 1248 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 ACOT1Q86TX2 421 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 SERINC5Q86VE9 423 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 KLHDC9Q8NEP7 349 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 ZNF560Q96MR9 790 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 HEMGNQ9BXL5 484 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 OSBPL8Q9BZF1 889 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 CDC42EP4Q9H3Q1 356 aaKnown RBP19.42■□□□□ 0.7
SPNS1-204ENST00000352260 TLE6Q9H808 572 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 CHST7Q9NS84 486 aa19.42■□□□□ 0.7
SPNS1-204ENST00000352260 CASP8AP2Q9UKL3 1982 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms