RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SLC24A2Q9UI40 661 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TIMM13Q9Y5L4 95 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 H3BRB1 525 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 GPR182O15218 404 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TPST1O60507 370 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 RPL10AP62906 217 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 FUT11Q495W5 492 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 MFSD7Q6UXD7 560 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 RIC8BQ9NVN3 520 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TAS2R14Q9NYV8 317 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 FAM237AA0A1B0GTK4 181 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 XPO1O14980 1071 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 MICAL2O94851 1124 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 SLC26A2P50443 739 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 NME5P56597 212 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 BST2Q10589 180 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 CCNJLQ8IV13 435 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 HAS1Q92839 578 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 CNDP1Q96KN2 507 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 KLRC4O43908 158 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TFE3P19532 575 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 AKAP5P24588 427 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 TKTL1P51854 596 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 FICDQ9BVA6 458 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
PTPN11-201ENST00000351677 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
PTPN11-201ENST00000351677 CASTOR2A6NHX0 329 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 EPHB6O15197 1021 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ELK3P41970 407 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CNTN2Q02246 1040 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 GCNT1Q02742 428 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 MIIPQ5JXC2 388 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 YAF2Q8IY57 180 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 UNKQ9C0B0 810 aaKnown RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ACP6Q9NPH0 428 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CRLS1Q9UJA2 301 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CES2O00748 559 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 TIMM44O43615 452 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SLC2A3P11169 496 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 FBXO32Q969P5 355 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CNBD2Q96M20 576 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 BARX2Q9UMQ3 279 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 TBC1D4O60343 1298 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 F9P00740 461 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ATP6V1E1P36543 226 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 PKN3Q6P5Z2 889 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 TEKT4Q8WW24 435 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 TUBGCP3Q96CW5 907 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 TRMT6Q9UJA5 497 aaKnown RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SUFUQ9UMX1 484 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 C5orf58C9J3I9 102 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 THP07101 528 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 HLA-DPA1P20036 260 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SSTR1P30872 391 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 RASA2Q15283 850 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CXorf56Q9H5V9 222 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 DNPEPQ9ULA0 475 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 RNF112Q9ULX5 631 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 PDE2AO00408 941 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 SOAT2O75908 522 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 PECAM1P16284 738 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ACAT1P24752 427 aaKnown RBP16.53■□□□□ 0.24
PTPN11-201ENST00000351677 PPP3CAQ08209 521 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 CDH18Q13634 790 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ERMARDQ5T6L9 678 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 C1orf186Q6ZWK4 172 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
PTPN11-201ENST00000351677 E9PBE3 544 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 DNALI1O14645 258 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-201ENST00000351677 KLHL41O60662 606 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 ENDOD1O94919 500 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 RALBP11234 206 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 RGS2P41220 211 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 MRNIPQ6NTE8 343 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 RAB42Q8N4Z0 105 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 EDEM1Q92611 657 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 GLT1D1Q96MS3 346 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 NINJ2Q9NZG7 142 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 RHBDL3P58872 404 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 VPS50Q96JG6 964 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 O00370 1275 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 SLC11A2P49281 568 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-201ENST00000351677 DDR1Q08345 913 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 EFEMP1Q12805 493 aa16.52■□□□□ 0.24
PTPN11-201ENST00000351677 NIPA1Q7RTP0 329 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms