RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TUBB8Q3ZCM7 444 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 GLIPR1L2Q4G1C9 344 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TIGD5Q53EQ6 642 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ODF2Q5BJF6 829 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 EFHC1Q5JVL4 640 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ZFYVE27Q5T4F4 411 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 UBAP2Q5T6F2 1119 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RNASEH2BQ5TBB1 312 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 OTUD1Q5VV17 481 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 IZUMO3Q5VZ72 239 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 DENND2CQ68D51 928 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SLC9A4Q6AI14 798 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 FAM171BQ6P995 826 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CLEC20AQ6ZU45 233 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 STRADAQ7RTN6 431 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CROCCP2Q86T23 111 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RTN4RL1Q86UN2 441 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RFX6Q8HWS3 928 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PSTKQ8IV42 348 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ZCCHC9Q8N567 271 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SH2D3CQ8N5H7 860 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PQLC3Q8N755 202 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ZMIZ2Q8NF64 920 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RAET1EQ8TD07 263 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CLEC4CQ8WTT0 213 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 FAM172AQ8WUF8 416 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 NT5C3BQ969T7 300 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PGM2Q96G03 612 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 GLT1D1Q96MS3 346 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 UROC1Q96N76 676 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RNF157Q96PX1 679 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SLC2A13Q96QE2 648 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PKMYT1Q99640 499 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ADAM2Q99965 735 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RTP3Q9BQQ7 232 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SYT15Q9BQS2 421 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF670Q9BS34 389 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 SNRNP25Q9BV90 132 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PHACTR1Q9C0D0 580 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 LRRC4CQ9HCJ2 640 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PCDH18Q9HCL0 1135 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 RGS18Q9NS28 235 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 DDX43Q9NXZ2 648 aaKnown RBP7.23□□□□□ -1.25
TRIM55-203ENST00000350034 CACNG4Q9UBN1 327 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ANAPC5Q9UJX4 755 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF148Q9UQR1 794 aa7.23□□□□□ -1.25
TRIM55-203ENST00000350034 TRIP11Q15643 1979 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MYBPHLA2RUH7 354 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CASTOR2A6NHX0 329 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA6L10A6NI86 522 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 HHLA1C9JL84 531 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TMEM189-UBE2V1I3L0A0 370 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TCEA3O75764 348 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 FBXO21O94952 628 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TTC4O95801 387 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 EOMESO95936 686 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 INHAP05111 366 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ABHD2P08910 425 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ZSCAN5DPP0CG00 497 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 LCP1P13796 627 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ETS1P14921 441 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TYMPP19971 482 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 TGM2P21980 687 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ACAT1P24752 427 aaKnown RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PCSK1P29120 753 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 L1CAMP32004 1257 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 RPL22P35268 128 aaKnown RBP7.22□□□□□ -1.25
TRIM55-203ENST00000350034 LMAN1P49257 510 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CDK7P50613 346 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 ATP11AP98196 1134 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 DSC1Q08554 894 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MMRN1Q13201 1228 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MORF4L2Q15014 288 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 DPYSL2Q16555 572 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CA9Q16790 459 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 P3H1Q32P28 736 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SLC25A52Q3SY17 297 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MDH1BQ5I0G3 518 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 RAB41Q5JT25 222 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 KCTD16Q68DU8 428 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MFSD5Q6N075 450 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 DCLRE1AQ6PJP8 1040 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 DSTYKQ6XUX3 929 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 CEP128Q6ZU80 1094 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PRUNE1Q86TP1 453 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 FAM35AQ86V20 835 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 HOOK3Q86VS8 718 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MAP7D3Q8IWC1 876 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SCML4Q8N228 414 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PLD5Q8N7P1 536 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SLAIN1Q8ND83 568 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PCDH19Q8TAB3 1148 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 MYCBPAPQ8TBZ2 947 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 LINC01599Q8WXQ3 324 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 HSPH1Q92598 858 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 RTP4Q96DX8 246 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 PCED1BQ96HM7 432 aa7.22□□□□□ -1.25
TRIM55-203ENST00000350034 SUSD3Q96L08 255 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms