RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TEX264Q9Y6I9 313 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 RBM47A0AV96 593 aaKnown RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 A8MUI8 341 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 IBSPP21815 317 aaPredicted RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 RBL1P28749 1068 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 RDXP35241 583 aaKnown RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 ATXN1P54253 815 aaKnown RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 KYAT1Q16773 422 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 KBTBD12Q3ZCT8 623 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 OTOAQ7RTW8 1153 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 SNRNP25Q9BV90 132 aaKnown RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 KIAA1257Q9ULG3 409 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 COL1A2P08123 1366 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 ADCY6O43306 1168 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 TFDP2Q14188 446 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 FAM47CQ5HY64 1035 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 CCDC33Q8N5R6 958 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 BANPQ8N9N5 519 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 SLC35F5Q8WV83 523 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 ERP27Q96DN0 273 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 SLC4A5Q9BY07 1137 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 FAM49AQ9H0Q0 323 aaPredicted RBP22.3■■□□□ 1.16
CCDC38-201ENST00000344280 ALG13Q9NP73 1137 aaKnown RBP22.3■■□□□ 1.16
CCDC38-201ENST00000344280 ARHGEF3Q9NR81 526 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 KAT6AQ92794 2004 aa22.3■■□□□ 1.16
CCDC38-201ENST00000344280 HDAC4P56524 1084 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 SLC6A3Q01959 620 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 E2F5Q15329 346 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 PRPF39Q86UA1 669 aaKnown RBP22.29■■□□□ 1.16
CCDC38-201ENST00000344280 TBC1D31Q96DN5 1066 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.29■■□□□ 1.16
CCDC38-201ENST00000344280 ZWINTO95229 277 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 YWHAGP61981 247 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCDC38-201ENST00000344280 PPP6R3Q5H9R7 873 aaPredicted RBP22.29■■□□□ 1.16
CCDC38-201ENST00000344280 TMEM110Q86TL2 294 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 SERAC1Q96JX3 654 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 CYTH2Q99418 400 aa22.29■■□□□ 1.16
CCDC38-201ENST00000344280 SSU72Q9NP77 194 aaKnown RBP22.29■■□□□ 1.16
CCDC38-201ENST00000344280 SMAPO00193 183 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PDHXO00330 501 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 FAM155BO75949 473 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 MMP3P08254 477 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 CCNB1P14635 433 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 SDC4P31431 198 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 BCAR1P56945 870 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 NT5DC4Q86YG4 428 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 C7orf31Q8N865 590 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 C10orf82Q8WW14 230 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 ADAMTS10Q9H324 1103 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 STK38LQ9Y2H1 464 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PLXNB2O15031 1838 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 DPYSL4O14531 572 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 APOL1O14791 398 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 UNC5CO95185 931 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 EPHX2P34913 555 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 YARSP54577 528 aaKnown RBP22.28■■□□□ 1.16
CCDC38-201ENST00000344280 CCDC15Q0P6D6 951 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 FAAP100Q0VG06 881 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PTK7Q13308 1070 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 BOLA3Q53S33 107 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PLEKHG4Q58EX7 1191 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 MAP7D3Q8IWC1 876 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PTPRN2Q92932 1015 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 SNX27Q96L92 541 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 PLAC1Q9HBJ0 212 aa22.28■■□□□ 1.16
CCDC38-201ENST00000344280 CHADO15335 359 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 YWHAZP63104 245 aaKnown RBP22.27■■□□□ 1.16
CCDC38-201ENST00000344280 PDK2Q15119 407 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 SOWAHAQ2M3V2 549 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 SLC9A4Q6AI14 798 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 OR6B3Q8NGW1 331 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 CCDC110Q8TBZ0 833 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 CFAP36Q96G28 342 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 CYLDQ9NQC7 956 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 USH1CQ9Y6N9 552 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 DNAH12Q6ZR08 3092 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 C1QAP02745 245 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 CCDC130P13994 396 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 GBP2P32456 591 aaPredicted RBP22.27■■□□□ 1.16
CCDC38-201ENST00000344280 ZBTB6Q15916 424 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 MAGEC3Q8TD91 643 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 SLC44A1Q8WWI5 657 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 SLC10A4Q96EP9 437 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 TRIM56Q9BRZ2 755 aaKnown RBP22.27■■□□□ 1.16
CCDC38-201ENST00000344280 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
CCDC38-201ENST00000344280 NUMBLQ9Y6R0 609 aa22.27■■□□□ 1.16
CCDC38-201ENST00000344280 ECM2O94769 699 aaPredicted RBP22.26■■□□□ 1.15
CCDC38-201ENST00000344280 ZBED1O96006 694 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 PDGFRBP09619 1106 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 ATP2A2P16615 1042 aaKnown RBP22.26■■□□□ 1.15
CCDC38-201ENST00000344280 AKAP5P24588 427 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 CCNA1P78396 465 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF200P98182 395 aaPredicted RBP22.26■■□□□ 1.15
CCDC38-201ENST00000344280 OVGP1Q12889 678 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF618Q5T7W0 954 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF410Q86VK4 478 aa22.26■■□□□ 1.15
CCDC38-201ENST00000344280 CAND1Q86VP6 1230 aaKnown RBP22.26■■□□□ 1.15
CCDC38-201ENST00000344280 TTC39CQ8N584 583 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms