RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CIDEBQ9UHD4 219 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RCOR1Q9UKL0 485 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 A0A087WWV3 80 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 TEX51A0A1B0GUA7 166 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 C5orf60A6NFR6 353 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF263O14978 683 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 LRG1P02750 347 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC166P0CW27 439 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 IDO1P14902 403 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 YWHABP31946 246 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NLRP12P59046 1061 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RPL10AP62906 217 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RTP5Q14D33 572 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 DUOXA1Q1HG43 343 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC92Q53HC0 331 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MON1AQ86VX9 555 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 DCP1BQ8IZD4 617 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 TTC30BQ8N4P2 665 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ZBTB8BQ8NAP8 495 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 GPR152Q8TDT2 470 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ASB12Q8WXK4 309 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CCT6BQ92526 530 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 C8orf48Q96LL4 319 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NACA2Q9H009 215 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 IL25Q9H293 177 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 PREBQ9HCU5 417 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 DMAP1Q9NPF5 467 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 BAIAP2L1Q9UHR4 511 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MAP3K13O43283 966 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 PCDHGA12O60330 932 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 DIAPH2O60879 1101 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 SYPP08247 313 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 GSTA1P08263 222 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CLTAP09496 248 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CCND1P24385 295 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 TARSP26639 723 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 SLC7A5Q01650 507 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ADAM9Q13443 819 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC73Q6ZRK6 1079 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 KIAA0907Q7Z7F0 614 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 IQCHQ86VS3 1027 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 EHBP1Q8NDI1 1231 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CSGALNACT1Q8TDX6 532 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RPGRIP1Q96KN7 1286 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 OSMRQ99650 979 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MRPL4Q9BYD3 311 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NRSN2Q9GZP1 204 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 KIAA1468Q9P260 1216 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 FBXO9Q9UK97 447 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 SLC27A6Q9Y2P4 619 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ADGRG1Q9Y653 693 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MED19A0JLT2 244 aaPredicted RBP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 GOLGA8AA7E2F4 631 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 GOLGA8BA8MQT2 603 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 CEP104O60308 925 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 RNGTTO60942 597 aaKnown RBP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 SERPINF2P08697 491 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 CSH1P0DML2 217 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 CSH2P0DML3 217 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 RARRES1P49788 294 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 GOLGA8FQ08AF8 430 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 GOLGA8DPQ0D2H9 430 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 INF2Q27J81 1249 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 TMPRSS7Q7RTY8 843 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 MAATS1Q7Z4T9 603 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 ATP11CQ8NB49 1132 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 AGAP11Q8TF27 550 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 FGF13Q92913 245 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 ATP2A3Q93084 1043 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 XPNPEP1Q9NQW7 623 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 FANCLQ9NW38 375 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 SPATA6Q9NWH7 488 aaPredicted RBP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.17
ZNF540-202ENST00000343599 AKT3Q9Y243 479 aa7.71□□□□□ -1.17
ZNF540-202ENST00000343599 CFAP73A6NFT4 308 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 PIRO00625 290 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 STK10O94804 968 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 LDHAP00338 332 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 ADD1P35611 737 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 MDH1P40925 334 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 EPHB3P54753 998 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 AKAP17AQ02040 695 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 SSRP1Q08945 709 aaKnown RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF569Q5MCW4 686 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 CYP4A22Q5TCH4 519 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 TTC39BQ5VTQ0 682 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 KLHL10Q6JEL2 608 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 USP17L6PQ6QN14 398 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 MPZL3Q6UWV2 235 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM110Q86TL2 294 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 ERICH1Q86X53 443 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 FMR1NBQ8N0W7 255 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-202ENST00000343599 ARL8AQ96BM9 186 aa7.71□□□□□ -1.18
ZNF540-202ENST00000343599 PANX2Q96RD6 677 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms