RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 APOL1O14791 398 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 USP1O94782 785 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 ASMTLO95671 621 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 GPD1P21695 349 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 ARL1P40616 181 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 EFNA5P52803 228 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 RNASEH2BQ5TBB1 312 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 RHBDF2Q6PJF5 856 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 PHF13Q86YI8 300 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 ACO2Q99798 780 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 MFHAS1Q9Y4C4 1052 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 CXorf49A8MYA2 514 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 TYK2P29597 1187 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 KLF1Q13351 362 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 RGS9BPQ6ZS82 235 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 OSMRQ99650 979 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 NTPCRQ9BSD7 190 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 NMUR2Q9GZQ4 415 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 LAMB2P55268 1798 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 FCHO1O14526 889 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 PPEF2O14830 753 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 KLRC2P26717 231 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 SERPINB4P48594 390 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 RASA2Q15283 850 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 KHDC1Q4VXA5 237 aaKnown RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 CEP128Q6ZU80 1094 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 CRLF3Q8IUI8 442 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 WDR49Q8IV35 697 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 MCUQ8NE86 351 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
LMX1A-202ENST00000342310 BRCA2P51587 3418 aa13.04□□□□□ -0.32
LMX1A-202ENST00000342310 CLUHO75153 1309 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 SRGAP2BP0DMP2 458 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
LMX1A-202ENST00000342310 TFDP2Q14188 446 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 CRYMQ14894 314 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 RWDD4Q6NW29 188 aaKnown RBP13.03□□□□□ -0.32
LMX1A-202ENST00000342310 TTC13Q8NBP0 860 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
LMX1A-202ENST00000342310 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
LMX1A-202ENST00000342310 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 WDR27A2RRH5 827 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 MTA2O94776 668 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 AVPR1AP37288 418 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
LMX1A-202ENST00000342310 GRAMD1BQ3KR37 738 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 VWA5B1Q5TIE3 1220 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 IER5Q5VY09 327 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 MPP5Q8N3R9 675 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 SPATA6LQ8N4H0 392 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 SDCBP2Q9H190 292 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 DPP3Q9NY33 737 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 SLX4Q8IY92 1834 aa13.03□□□□□ -0.32
LMX1A-202ENST00000342310 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 KIF1CO43896 1103 aaKnown RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 GSTA1P08263 222 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ARL4AP40617 200 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 BST1Q10588 318 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 MXD4Q14582 209 aaPredicted RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 PDK4Q16654 411 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 CDHR3Q6ZTQ4 885 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 HASPINQ8TF76 798 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 DNAJC9Q8WXX5 260 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 EXT2Q93063 718 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ATXN3LQ9H3M9 355 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ZNF358Q9NW07 568 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 AK5Q9Y6K8 562 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ALOX15BO15296 676 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 TBC1D12O60347 775 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 CTSHP09668 335 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms