RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 E7ENQ6 273 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 TREHO43280 583 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 TYROBPO43914 113 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 GJB5O95377 273 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 IFNAR2P48551 515 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 ACOT2P49753 483 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 WDR4P57081 412 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 SLC8A3P57103 927 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 SLC25A11Q02978 314 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 IKBKEQ14164 716 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 MPP2Q14168 576 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 KYAT1Q16773 422 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 HADHQ16836 314 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 DUOXA2Q1HG44 320 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 CMPK2Q5EBM0 449 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 MFSD7Q6UXD7 560 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 ZBTB8OSQ8IWT0 167 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
RTN3-201ENST00000338850 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 TARS2Q9BW92 718 aaKnown RBP11.27□□□□□ -0.61
RTN3-201ENST00000338850 BCO2Q9BYV7 579 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 LRMDAQ9H2I8 198 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 ACSS3Q9H6R3 686 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 SETD4Q9NVD3 440 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 DNPEPQ9ULA0 475 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 CLUHO75153 1309 aa11.27□□□□□ -0.61
RTN3-201ENST00000338850 GSTTP1A0A1W2PQM5 241 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 C3orf70A6NLC5 250 aaPredicted RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 VGLL3A8MV65 326 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 LPXNO60711 386 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 EDF1O60869 148 aaKnown RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 ENDOD1O94919 500 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 PECAM1P16284 738 aaPredicted RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 CD58P19256 250 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ALDH3A1P30838 453 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ATICP31939 592 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 PCK1P35558 622 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 GABRB2P47870 512 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 RASSF2P50749 326 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ARSEP51690 589 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ARL4CP56559 192 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ADAM17P78536 824 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 SP4Q02446 784 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CDK18Q07002 472 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 FAM91A1Q658Y4 838 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 SPOPLQ6IQ16 392 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 TLDC1Q6P9B6 456 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 SRRM1Q8IYB3 904 aaKnown RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 CYP4X1Q8N118 509 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 MAB21L3Q8N8X9 362 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 NAT8LQ8N9F0 302 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 DBF4BQ8NFT6 615 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 OR5B17Q8NGF7 314 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 UHMK1Q8TAS1 419 aaKnown RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 KLHL29Q96CT2 875 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 SMC6Q96SB8 1091 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 RAD9AQ99638 391 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ACO2Q99798 780 aaKnown RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
RTN3-201ENST00000338850 TRABDQ9H4I3 376 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ECT2Q9H8V3 914 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 KCNK9Q9NPC2 374 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 SAR1AQ9NR31 198 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 ZNF148Q9UQR1 794 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 NCOR1O75376 2440 aa11.26□□□□□ -0.61
RTN3-201ENST00000338850 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 CFAP69A5D8W1 941 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 APOC4-APOC2K7ER74 178 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 C2CD2LO14523 706 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 APOC2P02655 101 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 ATP5BP06576 529 aaKnown RBP11.25□□□□□ -0.61
RTN3-201ENST00000338850 GSTA2P09210 222 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 CTSHP09668 335 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 GNAT1P11488 350 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 CREB1P16220 341 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 MAGEA6P43360 314 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 ASPAP45381 313 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 GEMIN4P57678 1058 aaKnown RBP11.25□□□□□ -0.61
RTN3-201ENST00000338850 RPL7AP62424 266 aaKnown RBP11.25□□□□□ -0.61
RTN3-201ENST00000338850 TFDP1Q14186 410 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 SETDB1Q15047 1291 aa11.25□□□□□ -0.61
RTN3-201ENST00000338850 TMED2Q15363 201 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms