RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TIMM13Q9Y5L4 95 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 TRPC5OSA6NMA1 111 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SLC2A4P14672 509 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SKIV2L2P42285 1042 aaKnown RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 VAC14Q08AM6 782 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ATP6AP1LQ52LC2 224 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 FIG4Q92562 907 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 PMM1Q92871 262 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 C19orf60Q96EN9 201 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 WDR24Q96S15 920 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 MTMR12Q9C0I1 747 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 MIR1-1HGQ9H1L0 117 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF624Q9P2J8 865 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 UCHL3P15374 230 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 GRIK3Q13003 919 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 INAQ16352 499 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 COQ7Q99807 217 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 SNPHO15079 494 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 ACSL4O60488 711 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 NR3C2P08235 984 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 GPR141Q7Z602 305 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 SRLQ86TD4 932 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 KCNB2Q92953 911 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 NSL1Q96IY1 281 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 PPP1R2P1Q96PQ5 205 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CTNNAL1Q9UBT7 734 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 H3BN98 237 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 EXTL3O43909 919 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 AGTP01019 485 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 COPAP53621 1224 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FNDC3BQ53EP0 1204 aaKnown RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 EFL1Q7Z2Z2 1120 aaKnown RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CCT8L2Q96SF2 557 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 PDXKO00764 312 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 RAD51CO43502 376 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CETPP11597 493 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FOSL2P15408 326 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CBFBQ13951 182 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CSHL1Q14406 222 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 MAPK11Q15759 364 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 FAM228AQ86W67 206 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 BBS4Q96RK4 519 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 PACSIN1Q9BY11 444 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 SOHLH2Q9NX45 425 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■■■□□ 18.9
SHANK2-201ENST00000338508 CEP170Q5SW79 1584 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CDH16O75309 829 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 ZCCHC18P0CG32 403 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 ANAPC2Q9UJX6 822 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CTSEP14091 401 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 MAPK10P53779 464 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 RHAGQ02094 409 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 IQCF2Q8IXL9 164 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 PPP1R10Q96QC0 940 aaKnown RBP12.13□□□□□ -0.47
SHANK2-201ENST00000338508 CNTNAP2Q9UHC6 1331 aa12.13□□□□□ -0.47
SHANK2-201ENST00000338508 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 PLEKHA7Q6IQ23 1121 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF544Q6NX49 715 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 DET1Q7L5Y6 550 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 GPR182O15218 404 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 FAM20BO75063 409 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ERN1O75460 977 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 OR6B1O95007 311 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 TGM3Q08188 693 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 NFIXQ14938 502 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SLC18A3Q16572 532 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms