RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 USP20Q9Y2K6 914 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 CXCL8P10145 99 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 LRRC74AQ0VAA2 488 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 ETNPPLQ8TBG4 499 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 BAP1Q92560 729 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 DNAJC19Q96DA6 116 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 SEPT5Q99719 369 aaPredicted RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 WTIPA6NIX2 430 aaPredicted RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 CSDE1O75534 798 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 PSMA4P25789 261 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 ZRANB3Q5FWF4 1079 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 SPDYCQ5MJ68 293 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 ZNF662Q6ZS27 426 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 MICU2Q8IYU8 434 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 BLOC1S5Q8TDH9 187 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 EPS8L1Q8TE68 723 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 DPYSL4O14531 572 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 STX7O15400 261 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 PPP3CAQ08209 521 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 PGM5Q15124 567 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 WASHC2DQ5SRD0 308 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 HAS1Q92839 578 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 THUMPD3Q9BV44 507 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 UBE2OQ9C0C9 1292 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 EVPLLA8MZ36 301 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 KBTBD13C9JR72 458 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 CBX6O95503 412 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 DPEP1P16444 411 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 CLK1P49759 484 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 GNASQ5JWF2 1037 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 AADACL2Q6P093 401 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 IYDQ6PHW0 289 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 PATL1Q86TB9 770 aaKnown RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 ANKRD13AQ8IZ07 590 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 DEFB107AQ8IZN7 70 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 COLGALT1Q8NBJ5 622 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 ZNF75CPQ92670 426 aaPredicted RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 APBB2Q92870 758 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 TRIM45Q9H8W5 580 aaPredicted RBP14.19□□□□□ -0.14
RTN4-202ENST00000337526 TMEM161AQ9NX61 479 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 TAS2R14Q9NYV8 317 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 ITSN1Q15811 1721 aa14.19□□□□□ -0.14
RTN4-202ENST00000337526 IQCA1LA6NCM1 817 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 SLCO1B7G3V0H7 640 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 PSMC3P17980 439 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ITGA9Q13797 1035 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 IL17AQ16552 155 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.18□□□□□ -0.143e-7■□□□□ 8.1
RTN4-202ENST00000337526 P3H2Q8IVL5 708 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 TTC30BQ8N4P2 665 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.18□□□□□ -0.143e-10■■■■■ 28.4
RTN4-202ENST00000337526 DDI1Q8WTU0 396 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 JADE3Q92613 823 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ZBTB10Q96DT7 871 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 VPS50Q96JG6 964 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 SLITRK1Q96PX8 696 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 BTBD10Q9BSF8 475 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 C17orf80Q9BSJ5 609 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 TISP43B9A030 160 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 HNRNPRO43390 633 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 CYBBP04839 570 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 CYP2F1P24903 491 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 HNRNPH3P31942 346 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 C10orf120Q5SQS8 335 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 C1orf186Q6ZWK4 172 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 MREGQ8N565 214 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ANKRD27Q96NW4 1050 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 RPRD1AQ96P16 312 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 SRPK1Q96SB4 655 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 ACP6Q9NPH0 428 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 KCNQ5Q9NR82 932 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 PRPF4O43172 522 aaKnown RBP eCLIP14.18□□□□□ -0.14
RTN4-202ENST00000337526 PGK2P07205 417 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ADRA1DP25100 572 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 S100A5P33763 92 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 OR1G1P47890 313 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 SPATA20Q8TB22 786 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 RBBP8Q99708 897 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 C15orf41Q9Y2V0 281 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 A0A087WZ62 844 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ARHGEF9O43307 516 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 SNX3O60493 162 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 ATP9AO75110 1047 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 VTNP04004 478 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 TNFRSF8P28908 595 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 MRPS15P82914 257 aaKnown RBP14.18□□□□□ -0.14
RTN4-202ENST00000337526 AMPD2Q01433 879 aa14.18□□□□□ -0.14
RTN4-202ENST00000337526 LAMTOR4Q0VGL1 99 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms