RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
LIMK1-201ENST00000336180 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
LIMK1-201ENST00000336180 FAM105AQ9NUU6 356 aa13.14□□□□□ -0.31
LIMK1-201ENST00000336180 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
LIMK1-201ENST00000336180 CREB3O43889 395 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 AMHP03971 560 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 RBL1P28749 1068 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 SKOR1P84550 965 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 BSPRYQ5W0U4 402 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 NLRP14Q86W24 1093 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 DEFB106AQ8N104 65 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 B3GALNT2Q8NCR0 500 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 VRTNQ9H8Y1 702 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 CHMP2BQ9UQN3 213 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 MPP2Q14168 576 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 ARL5CA6NH57 179 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 B3GAT3O94766 335 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 SLC35B2Q8TB61 432 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 P3H4Q92791 437 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 TPX2Q9ULW0 747 aaKnown RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
LIMK1-201ENST00000336180 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
LIMK1-201ENST00000336180 NRP1O14786 923 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
LIMK1-201ENST00000336180 NUDT17P0C025 328 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 CYBAP13498 195 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 GOT1P17174 413 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 IL4RP24394 825 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 TAP1Q03518 808 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 OLIG2Q13516 323 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 IGDCC3Q8IVU1 814 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 CPT1BQ92523 772 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 MCF2LO15068 1137 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
LIMK1-201ENST00000336180 USP17L7P0C7H9 530 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 GABRB2P47870 512 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 DYDC1Q8WWB3 177 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 ADAM2Q99965 735 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 CRTAC1Q9NQ79 661 aa13.12□□□□□ -0.31
LIMK1-201ENST00000336180 EXOC1LA0A1B0GW35 172 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 SULT1E1P49888 294 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 IFT88Q13099 833 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 SOCS4Q8WXH5 440 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 TLCD1Q96CP7 247 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 WDR83Q9BRX9 315 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 XPO7Q9UIA9 1087 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 PTPN1P18031 435 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 GRIA1P42261 906 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 LIG3P49916 1009 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 FCGRTP55899 365 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 LRRC38Q5VT99 294 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CFAP36Q96G28 342 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 KATNAL1Q9BW62 490 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 EPN3Q9H201 632 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 INTS9Q9NV88 658 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CWC15Q9P013 229 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 TMEM120BA0PK00 339 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms