RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ANAPC7Q9UJX3 599 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 SCML2Q9UQR0 700 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 HCFC2Q9Y5Z7 792 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 REV3LO60673 3130 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 GRID2IPA4D2P6 1211 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 RTN3O95197 1032 aaPredicted RBP22.56■■□□□ 1.2
TPM1-204ENST00000334895 FYNP06241 537 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 NRIP1P48552 1158 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 RNASE9P60153 205 aaKnown RBP22.56■■□□□ 1.2
TPM1-204ENST00000334895 RBM10P98175 930 aaKnown RBP22.56■■□□□ 1.2
TPM1-204ENST00000334895 DCUN1D2Q6PH85 259 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 CCDC149Q6ZUS6 474 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 NYAP1Q6ZVC0 841 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 SCD5Q86SK9 330 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 LRRC57Q8N9N7 239 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 IRGQQ8WZA9 623 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 GAS2L1Q99501 681 aaPredicted RBP22.56■■□□□ 1.2
TPM1-204ENST00000334895 GOLPH3Q9H4A6 298 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 FBXO44Q9H4M3 255 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 TLE6Q9H808 572 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 ASNSD1Q9NWL6 643 aa22.56■■□□□ 1.2
TPM1-204ENST00000334895 C2CD4BA6NLJ0 364 aa22.55■■□□□ 1.2
TPM1-204ENST00000334895 BUB1BO60566 1050 aaPredicted RBP22.55■■□□□ 1.2
TPM1-204ENST00000334895 YWHAQP27348 245 aa22.55■■□□□ 1.2
TPM1-204ENST00000334895 GTF2F1P35269 517 aaKnown RBP eCLIP22.55■■□□□ 1.2
TPM1-204ENST00000334895 NAP1L1P55209 391 aaKnown RBP22.55■■□□□ 1.2
TPM1-204ENST00000334895 EFHC1Q5JVL4 640 aa22.55■■□□□ 1.2
TPM1-204ENST00000334895 VN1R2Q8NFZ6 395 aa22.55■■□□□ 1.2
TPM1-204ENST00000334895 COMMD8Q9NX08 183 aa22.55■■□□□ 1.2
TPM1-204ENST00000334895 SART1O43290 800 aaKnown RBP22.54■■□□□ 1.2
TPM1-204ENST00000334895 HSF2BPO75031 334 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 IGFBP4P22692 258 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 YWHAZP63104 245 aaKnown RBP22.54■■□□□ 1.2
TPM1-204ENST00000334895 TAF10Q12962 218 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 KCNC3Q14003 757 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 ARCQ7LC44 396 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 CPNE8Q86YQ8 564 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 FAM149B1Q96BN6 582 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 MYRFLQ96LU7 910 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 PLEKHA4Q9H4M7 779 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 NMUR1Q9HB89 426 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 GMIPQ9P107 970 aa22.54■■□□□ 1.2
TPM1-204ENST00000334895 MAGED2Q9UNF1 606 aaPredicted RBP22.54■■□□□ 1.2
TPM1-204ENST00000334895 DAB1O75553 588 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 RFPL2O75678 378 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 PALMO75781 387 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 ZMYND10O75800 440 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 LTFP02788 710 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 GLI1P08151 1106 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 CSH1P0DML2 217 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 CSH2P0DML3 217 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 EPHB3P54753 998 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 PLD1Q13393 1074 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 DNAJB7Q7Z6W7 309 aaPredicted RBP22.53■■□□□ 1.2
TPM1-204ENST00000334895 RXFP2Q8WXD0 754 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 FBXO32Q969P5 355 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 PSMG2Q969U7 264 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 SLC2A13Q96QE2 648 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 OSER1Q9NX31 292 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 A0A1W2PQH9 124 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 FANCGO15287 622 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 ZNF500O60304 480 aaPredicted RBP22.53■■□□□ 1.2
TPM1-204ENST00000334895 FOSL2P15408 326 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 MESDQ14696 234 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 VEPH1Q14D04 833 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 SYPL2Q5VXT5 272 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 BSPRYQ5W0U4 402 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 SLFN11Q7Z7L1 901 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 DEFB106AQ8N104 65 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 FNIP1Q8TF40 1166 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 HDAC7Q8WUI4 952 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 TRMT2BQ96GJ1 504 aaKnown RBP22.53■■□□□ 1.2
TPM1-204ENST00000334895 C16orf45Q96MC5 204 aaPredicted RBP22.53■■□□□ 1.2
TPM1-204ENST00000334895 ADAM33Q9BZ11 813 aa22.53■■□□□ 1.2
TPM1-204ENST00000334895 MYO1FO00160 1098 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 KIF5CO60282 957 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 LRG1P02750 347 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 ZDHHC11BP0C7U3 371 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 GPD1P21695 349 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 YWHAGP61981 247 aaKnown RBP eCLIP22.52■■□□□ 1.2
TPM1-204ENST00000334895 IFI16Q16666 785 aaKnown RBP22.52■■□□□ 1.2
TPM1-204ENST00000334895 ZNF569Q5MCW4 686 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 PPM1LQ5SGD2 360 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 C11orf63Q6NUN7 778 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 RTL10Q7L3V2 364 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 CALR3Q96L12 384 aaKnown RBP22.52■■□□□ 1.2
TPM1-204ENST00000334895 WDR24Q96S15 920 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 NSUN3Q9H649 340 aaKnown RBP22.52■■□□□ 1.2
TPM1-204ENST00000334895 POPDC2Q9HBU9 364 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 ZNF334Q9HCZ1 680 aaPredicted RBP22.52■■□□□ 1.2
TPM1-204ENST00000334895 NAALADL1Q9UQQ1 740 aa22.52■■□□□ 1.2
TPM1-204ENST00000334895 TMEM110-MUSTN1A8MSY1 372 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 DPYSL4O14531 572 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 CCL16O15467 120 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 PROSCO94903 275 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 PDGFRAP16234 1089 aa22.51■■□□□ 1.19
TPM1-204ENST00000334895 TFE3P19532 575 aaPredicted RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 ZNF143P52747 638 aaPredicted RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 PITX1P78337 314 aaPredicted RBP22.51■■□□□ 1.19
TPM1-204ENST00000334895 CCDC14Q49A88 953 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms