RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 KBTBD12Q3ZCT8 623 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 BOLA3Q53S33 107 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 FAXCQ5TGI0 409 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 MZB1Q8WU39 189 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 SNRNP25Q9BV90 132 aaKnown RBP18.44■□□□□ 0.54
LRCH3-201ENST00000334859 FAM49AQ9H0Q0 323 aaPredicted RBP18.44■□□□□ 0.54
LRCH3-201ENST00000334859 FAM124BQ9H5Z6 455 aaPredicted RBP18.44■□□□□ 0.54
LRCH3-201ENST00000334859 PAK5Q9P286 719 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 TUBGCP4Q9UGJ1 667 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 CHADO15335 359 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 UNC5CO95185 931 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 MT-ND3P03897 115 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 CCNB1P14635 433 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF200P98182 395 aaPredicted RBP18.44■□□□□ 0.54
LRCH3-201ENST00000334859 FYB2Q5VWT5 728 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 MAGEC3Q8TD91 643 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 B3GNT5Q9BYG0 378 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 ETNK1Q9HBU6 452 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 PCDH18Q9HCL0 1135 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 TXLNGQ9NUQ3 528 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 SNTG2Q9NY99 539 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 SLC17A7Q9P2U7 560 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 CHKBQ9Y259 395 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 TEX264Q9Y6I9 313 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 PLXNB2O15031 1838 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 IQANK1A0A1B0GTG1 560 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 DPYSL4O14531 572 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 EZRP15311 586 aaKnown RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 RBL1P28749 1068 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 SLC6A3Q01959 620 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 RIPK1Q13546 671 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 CA9Q16790 459 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 DCAF4L1Q3SXM0 396 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 MARCH8Q5T0T0 291 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 OTOAQ7RTW8 1153 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 PQLC3Q8N755 202 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 BANPQ8N9N5 519 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 LRRN4Q8WUT4 740 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ZMAT2Q96NC0 199 aaKnown RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 USP29Q9HBJ7 922 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 NPHS2Q9NP85 383 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ARHGEF3Q9NR81 526 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 TM9SF1O15321 606 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 DCTN3O75935 186 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 TGM2P21980 687 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 IL4RP24394 825 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 SKIV2L2P42285 1042 aaKnown RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 PREPLQ4J6C6 727 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ASRGL1Q7L266 308 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC91Q7Z6B0 441 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF410Q86VK4 478 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 OR6B3Q8NGW1 331 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 PCDH19Q8TAB3 1148 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 EMID1Q96A84 441 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ALKBH8Q96BT7 664 aaKnown RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 KLC2Q9H0B6 622 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 ALG13Q9NP73 1137 aaKnown RBP18.43■□□□□ 0.54
LRCH3-201ENST00000334859 RNF19AQ9NV58 838 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 HES2Q9Y543 173 aa18.43■□□□□ 0.54
LRCH3-201ENST00000334859 PAPSS1O43252 624 aaPredicted RBP18.42■□□□□ 0.54
LRCH3-201ENST00000334859 LPXNO60711 386 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 APRTP07741 180 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 CATSPER4Q7RTX7 472 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 C10orf82Q8WW14 230 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 TEKT4Q8WW24 435 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 C18orf25Q96B23 403 aaPredicted RBP18.42■□□□□ 0.54
LRCH3-201ENST00000334859 TBCBQ99426 244 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 LPIN3Q9BQK8 851 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 A8MUI8 341 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 TARSP26639 723 aaKnown RBP18.42■□□□□ 0.54
LRCH3-201ENST00000334859 YWHAZP63104 245 aaKnown RBP18.42■□□□□ 0.54
LRCH3-201ENST00000334859 FAAP100Q0VG06 881 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 PKDCCQ504Y2 493 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 CTAGE3PQ8IX95 158 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 SLC44A1Q8WWI5 657 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 SLC4A5Q9BY07 1137 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
LRCH3-201ENST00000334859 CFAP69A5D8W1 941 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 SPAG6O75602 509 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 MMP3P08254 477 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 SETSIPP0DME0 302 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 TFE3P19532 575 aaPredicted RBP18.41■□□□□ 0.54
LRCH3-201ENST00000334859 HDAC4P56524 1084 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC110Q8TBZ0 833 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 PPP1R13LQ8WUF5 828 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 SLC35F5Q8WV83 523 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 SERAC1Q96JX3 654 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 SNX27Q96L92 541 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 APOL6Q9BWW8 343 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 EIF2AQ9BY44 585 aaKnown RBP18.41■□□□□ 0.54
LRCH3-201ENST00000334859 DPEP3Q9H4B8 488 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 NME7Q9Y5B8 376 aa18.41■□□□□ 0.54
LRCH3-201ENST00000334859 RBM47A0AV96 593 aaKnown RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 A8MXQ7 604 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 HCRTO43612 131 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms