RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 STX2P32856 288 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 CDKN2BP42772 138 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 FNTAP49354 379 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 ZNF132P52740 706 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 PPP2R2AP63151 447 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SLC6A3Q01959 620 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SLMAPQ14BN4 828 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SIX1Q15475 284 aaPredicted RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 HIF1AQ16665 826 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SV2CQ496J9 727 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 DENND5BQ6ZUT9 1274 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 RNF180Q86T96 592 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 CABS1Q96KC9 395 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 CYP3A43Q9HB55 503 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SDK1Q7Z5N4 2213 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 PTGESO14684 152 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 TRUB2O95900 331 aaKnown RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 POU5F1Q01860 360 aaKnown RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 ITKQ08881 620 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 CCNG2Q16589 344 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 DDR2Q16832 855 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 TIGD5Q53EQ6 642 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 NUGGCQ68CJ6 796 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 TAF2Q6P1X5 1199 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 ARFGAP2Q8N6H7 521 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SLC13A1Q9BZW2 595 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SENP6Q9GZR1 1112 aaPredicted RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 RSAD1Q9HA92 442 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 ZDHHC18Q9NUE0 388 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 ETNK2Q9NVF9 386 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 PCYOX1Q9UHG3 505 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 TPX2Q9ULW0 747 aaKnown RBP9.41□□□□□ -0.9
COPB2-201ENST00000333188 TRPV2Q9Y5S1 764 aa9.41□□□□□ -0.9
COPB2-201ENST00000333188 SCN1AP35498 2009 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 GOLGA8TH3BQL2 631 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 APOL1O14791 398 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 MDM4O15151 490 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 MSI1O43347 362 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 MGEA5O60502 916 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 TADA2AO75478 443 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ITIH2P19823 946 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 CYP2F1P24903 491 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 DNAJB2P25686 324 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ARHGEF18Q6ZSZ5 1173 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ZNF572Q7Z3I7 529 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 PDIK1LQ8N165 341 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 DNAAF3Q8N9W5 541 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 PCED1BQ96HM7 432 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 SEPT5Q99719 369 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 LBHD1Q9BQE6 289 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 LRRC19Q9H756 370 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 FAM53CQ9NYF3 392 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 NINJ2Q9NZG7 142 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 E7ENQ6 273 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 DFFAO00273 331 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 CES2O00748 559 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 SEPT4O43236 478 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 CPB1P15086 417 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 CA4P22748 312 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 MDH1P40925 334 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.9
COPB2-201ENST00000333188 CACNA2D1P54289 1103 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 BCAT1P54687 386 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 BST2Q10589 180 aaKnown RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 LCLAT1Q6UWP7 414 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 PID1Q7Z2X4 250 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
COPB2-201ENST00000333188 METTL23Q86XA0 190 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 DEFB118Q96PH6 123 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 ATXN3LQ9H3M9 355 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 NKIRAS1Q9NYS0 192 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.4□□□□□ -0.92e-7■■■■■ 29
COPB2-201ENST00000333188 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 LRFN2Q9ULH4 789 aa9.4□□□□□ -0.9
COPB2-201ENST00000333188 TMEM120BA0PK00 339 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 NRP1O14786 923 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 ATP9BO43861 1147 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 SLC10A3P09131 477 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 EPHB2P29323 1055 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 GRIA1P42261 906 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 ZNF143P52747 638 aaPredicted RBP9.4□□□□□ -0.91
COPB2-201ENST00000333188 CENPUQ71F23 418 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 ATAD1Q8NBU5 361 aa9.4□□□□□ -0.91
COPB2-201ENST00000333188 FBXO36Q8NEA4 188 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms