RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 FTCDO95954 541 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 CCDC130P13994 396 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 ELF1P32519 619 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 MAN1A1P33908 653 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 OR1D2P34982 312 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 SLC26A9Q7LBE3 791 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 SYCE1Q8N0S2 351 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 MYRFLQ96LU7 910 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 SMOQ99835 787 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 TCF25Q9BQ70 676 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 C17orf80Q9BSJ5 609 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 LRRC4Q9HBW1 653 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 ENTPD7Q9NQZ7 604 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 FAM49BQ9NUQ9 324 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 UXTQ9UBK9 157 aaPredicted RBP9.96□□□□□ -0.81
C11orf54-201ENST00000331239 FBXW11Q9UKB1 542 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.81
C11orf54-201ENST00000331239 PLXNA3P51805 1871 aa9.96□□□□□ -0.81
C11orf54-201ENST00000331239 TCRBV5S1A1TA0A578 114 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 GRID2IPA4D2P6 1211 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 HHLA1C9JL84 531 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 AGPSO00116 658 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 TEX28O15482 410 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 DNAJB2P25686 324 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 ADORA2BP29275 332 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 PBX3P40426 434 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 DNA2P51530 1060 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 MRPS25P82663 173 aaKnown RBP9.96□□□□□ -0.82
C11orf54-201ENST00000331239 SLC7A5Q01650 507 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 SLC6A3Q01959 620 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 MEI1Q5TIA1 1274 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 PRSS55Q6UWB4 352 aaPredicted RBP9.96□□□□□ -0.82
C11orf54-201ENST00000331239 PIGZQ86VD9 579 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 NUP93Q8N1F7 819 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 MRPL38Q96DV4 380 aaKnown RBP9.96□□□□□ -0.82
C11orf54-201ENST00000331239 MS4A14Q96JA4 679 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 HINFPQ9BQA5 517 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 PACSIN1Q9BY11 444 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 NKX2-4Q9H2Z4 354 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 SYNCQ9H7C4 482 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 ACP6Q9NPH0 428 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 SCML2Q9UQR0 700 aa9.96□□□□□ -0.82
C11orf54-201ENST00000331239 GREB1Q4ZG55 1949 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 WDR27A2RRH5 827 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 TNFRSF10BO14763 440 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 TNRC18O15417 2968 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CSH1P0DML2 217 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CSH2P0DML3 217 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 SLC1A1P43005 524 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ACBD5Q5T8D3 534 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 SNX30Q5VWJ9 437 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 PMF1Q6P1K2 205 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 TMEM184AQ6ZMB5 413 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 XYLT1Q86Y38 959 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 NIPA2Q8N8Q9 360 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CMASQ8NFW8 434 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CPA5Q8WXQ8 436 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CAVIN3Q969G5 261 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 TMLHEQ9NVH6 421 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 DZANK1Q9NVP4 752 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 DPYSL4O14531 572 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 HSF2BPO75031 334 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 GLUD1P00367 558 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 SRGAP2BP0DMP2 458 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 BDNFP23560 247 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 GRIK1P39086 918 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ALDH1A3P47895 512 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 EPHB3P54753 998 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 NNTQ13423 1086 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 VEPH1Q14D04 833 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 PTPN20Q4JDL3 420 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 C11orf63Q6NUN7 778 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 RSPO2Q6UXX9 243 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 MON1AQ86VX9 555 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 PALB2Q86YC2 1186 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 SIX6OS1Q8N1H7 587 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ZMIZ2Q8NF64 920 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 FAM76AQ8TAV0 307 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 UBA3Q8TBC4 463 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 SLC22A17Q8WUG5 538 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ZNF653Q96CK0 615 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CPXM1Q96SM3 734 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 CNOT8Q9UFF9 292 aaKnown RBP9.95□□□□□ -0.82
C11orf54-201ENST00000331239 IP6K2Q9UHH9 426 aa9.95□□□□□ -0.82
C11orf54-201ENST00000331239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
C11orf54-201ENST00000331239 GOLGA6CA6NDK9 693 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 GOLGA6DP0CG33 693 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 TUBP50607 506 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 CLCN4P51793 760 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 ERVFC1P60507 584 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 MRPS5P82675 430 aaKnown RBP9.94□□□□□ -0.82
C11orf54-201ENST00000331239 ORC1Q13415 861 aa9.94□□□□□ -0.82
C11orf54-201ENST00000331239 MAMLD1Q13495 774 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms