RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PLEKHA7Q6IQ23 1121 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 DNAJB7Q7Z6W7 309 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 DEFB123Q8N688 67 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CELF5Q8N6W0 485 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 UBL4BQ8N7F7 174 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SLC30A5Q8TAD4 765 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 FEZF2Q8TBJ5 459 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 RUNDC3BQ96NL0 473 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PAAF1Q9BRP4 392 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SLC2A11Q9BYW1 496 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PRDM12Q9H4Q4 367 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 TRPV5Q9NQA5 729 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 FAM49BQ9NUQ9 324 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MTMR10Q9NXD2 777 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 NAGPAQ9UK23 515 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 F8VP50 259 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 B4GALT3O60512 393 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 NFATC1O95644 943 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 KRT3P12035 628 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CHKAP35790 457 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MATKP42679 507 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 HARS2P49590 506 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MAP3K7CLP57077 242 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 GEMIN4P57678 1058 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 COPS2P61201 443 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 TUBB4BP68371 445 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 KCNC3Q14003 757 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 DMC1Q14565 340 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 RABGAP1LQ5R372 815 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CC2D1AQ6P1N0 951 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF783Q6ZMS7 281 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MON1BQ7L1V2 547 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 POLNQ7Z5Q5 900 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CNPY4Q8N129 248 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 TRIM58Q8NG06 486 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 WFIKKN2Q8TEU8 576 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CPLX3Q8WVH0 158 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 LRRC45Q96CN5 670 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SMOQ99835 787 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 DDX23Q9BUQ8 820 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 BRD8Q9H0E9 1235 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 C8orf33Q9H7E9 229 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 ST7Q9NRC1 585 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 STIM2Q9P246 746 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CNOT8Q9UFF9 292 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 TIMM13Q9Y5L4 95 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PLXNA3P51805 1871 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 TRIP11Q15643 1979 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 I3L4J1 428 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PSTPIP1O43586 416 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC130P13994 396 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 ACAT1P24752 427 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 AVPR1AP37288 418 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 FXR1P51114 621 aaKnown RBP eCLIP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PTP4A2Q12974 167 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SLC12A1Q13621 1099 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 HSF5Q4G112 596 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PPP1R15BQ5SWA1 713 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 DENND1BQ6P3S1 775 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 LRRC31Q6UY01 552 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 SLC47A2Q86VL8 602 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CPXM2Q8N436 756 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CPA6Q8N4T0 437 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 LZTR1Q8N653 840 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PHF7Q9BWX1 381 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 CLDND1Q9NY35 253 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 RNF14Q9UBS8 474 aa5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 MTCL1Q9Y4B5 1905 aaKnown RBP5.41□□□□□ -1.54
LRIT3-201ENST00000327908 PLXNA4Q9HCM2 1894 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 TNFRSF10BO14763 440 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 KIF5CO60282 957 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 FTLP02792 175 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 LMO2P25791 158 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 CCR1P32246 355 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 IFNAR2P48551 515 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF143P52747 638 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ADIGQ0VDE8 80 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 PDK2Q15119 407 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 SLC25A52Q3SY17 297 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 RARS2Q5T160 578 aaKnown RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 FAM102AQ5T9C2 384 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 HGSNATQ68CP4 663 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 TTC30AQ86WT1 665 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 PALB2Q86YC2 1186 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 GLYCTKQ8IVS8 523 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 LRRC8AQ8IWT6 810 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 UBALD2Q8IYN6 164 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ELSPBP1Q96BH3 223 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 SHDQ96IW2 340 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 RBM41Q96IZ5 413 aaKnown RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 HAPLN3Q96S86 360 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 CDX2Q99626 313 aaPredicted RBP5.4□□□□□ -1.54
LRIT3-201ENST00000327908 ULBP1Q9BZM6 244 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 FAM204AQ9H8W3 233 aa5.4□□□□□ -1.54
LRIT3-201ENST00000327908 CTTNBP2NLQ9P2B4 639 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms