RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CRY1Q16526 586 aa18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 NUDT18Q6ZVK8 323 aa18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 ZMIZ2Q8NF64 920 aa18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 CNOT6LQ96LI5 555 aaKnown RBP18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 CNOT1A5YKK6 2376 aaKnown RBP18.73■□□□□ 0.59
PTPMT1-201ENST00000326656 MYOFQ9NZM1 2061 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 HOXC11O43248 304 aaPredicted RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 GDF9O60383 454 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 ALDH1A2O94788 518 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 FAM200BP0CF97 657 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 GTF2H1P32780 548 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 PSMC2P35998 433 aaKnown RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 PIK3CAP42336 1068 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 LY6G5CQ5SRR4 150 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 BTBD8Q5XKL5 378 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 KRBA2Q6ZNG9 492 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 TTC39CQ8N584 583 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 CNTNAP3BQ96NU0 1288 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 NT5C1AQ9BXI3 368 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 CNTNAP3Q9BZ76 1288 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 NACA2Q9H009 215 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 FAM124BQ9H5Z6 455 aaPredicted RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 CCSER2Q9H7U1 834 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 ARHGEF4Q9NR80 690 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 GMIPQ9P107 970 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 SCML2Q9UQR0 700 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 TPRP12270 2363 aaKnown RBP18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 EPG5Q9HCE0 2579 aa18.72■□□□□ 0.59
PTPMT1-201ENST00000326656 ACACBO00763 2458 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 TLR5O60602 858 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 ADRB1P08588 477 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 CCDC130P13994 396 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 MPLP40238 635 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 SLC6A11P48066 632 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 ADAM9Q13443 819 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 EDRF1Q3B7T1 1238 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 EOGTQ5NDL2 527 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 IL31Q6EBC2 164 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 KLHDC10Q6PID8 442 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 HTR3DQ70Z44 454 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 FAM186BQ8IYM0 893 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 ZNF276Q8N554 614 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 CYLDQ9NQC7 956 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 PCDHA5Q9Y5H7 936 aa18.71■□□□□ 0.59
PTPMT1-201ENST00000326656 CACNA1BQ00975 2339 aa18.71■□□□□ 0.58
PTPMT1-201ENST00000326656 BCLAF3A2AJT9 711 aaKnown RBP18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 TM4SF5O14894 197 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 BEST1O76090 585 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 ZNF202O95125 648 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 ATP5C1P36542 298 aaKnown RBP18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 KIR2DL1P43626 348 aaPredicted RBP18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 PSEN1P49768 467 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 SEC13P55735 322 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 MAP3K7CLP57077 242 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 GOLGA8FQ08AF8 430 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 GOLGA8DPQ0D2H9 430 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 SF3A2Q15428 464 aaKnown RBP18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 PPM1JQ5JR12 505 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 ETFBKMTQ8IXQ9 262 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 C12orf29Q8N999 325 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 IL17RCQ8NAC3 791 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 OLIG1Q8TAK6 271 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 CYFIP2Q96F07 1278 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 NIF3L1Q9GZT8 377 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 TMEM8AQ9HCN3 771 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 POLMQ9NP87 494 aaPredicted RBP18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 SPHK2Q9NRA0 654 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 DEC1Q9P2X7 70 aa18.7■□□□□ 0.58
PTPMT1-201ENST00000326656 STX10O60499 249 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 CHRM1P11229 460 aaPredicted RBP18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 GCLMP48507 274 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 PPP3CAQ08209 521 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 BYSLQ13895 437 aaKnown RBP18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 ZCWPW2Q504Y3 356 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 KRT39Q6A163 491 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 SPOPLQ6IQ16 392 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 ANO7Q6IWH7 933 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 CLEC20AQ6ZU45 233 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 TRMT11Q7Z4G4 463 aaKnown RBP18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 PHTF2Q8N3S3 785 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 CCDC33Q8N5R6 958 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 TAS1R2Q8TE23 839 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 ELMO3Q96BJ8 720 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 KLF16Q9BXK1 252 aaPredicted RBP18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 FAM49BQ9NUQ9 324 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 HMGXB4Q9UGU5 601 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 MAPK8IP1Q9UQF2 711 aa18.69■□□□□ 0.58
PTPMT1-201ENST00000326656 TBC1D3BA6NDS4 549 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 HHLA1C9JL84 531 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 DCLK1O15075 740 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 CILPO75339 1184 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 CAVIN2O95810 425 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 PRR29P0C7W0 189 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 GBP1P32455 592 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 SPDYCQ5MJ68 293 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms