RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 STX11O75558 287 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 MYL2P10916 166 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 MDH1P40925 334 aaKnown RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TAF2Q6P1X5 1199 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 DDIASQ8IXT1 998 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 BTKQ06187 659 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 NSUN2Q08J23 767 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 CDC73Q6P1J9 531 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 GAS2L3Q86XJ1 694 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 COL15A1P39059 1388 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 CYP2C8P10632 490 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 MAPK1P28482 360 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 GCLMP48507 274 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TRAF3Q13114 568 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 IRGCQ6NXR0 463 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 CIDECQ96AQ7 238 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 AGPAT1Q99943 283 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 GDF11O95390 407 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 EIF2AK2P19525 551 aaKnown RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 PPM1LQ5SGD2 360 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 CDK5RAP1Q96SZ6 601 aaKnown RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 THEGLP0DJG4 465 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 GDI2P50395 445 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ARSHQ5FYA8 562 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 RHPN2Q8IUC4 686 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 PTPRN2Q92932 1015 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 SERPINB12Q96P63 405 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 A0A087WXM4 84 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 SLCO1B7G3V0H7 640 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 MDM4O15151 490 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ATP6V1G1O75348 118 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 EPHA7Q15375 998 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 CD302Q8IX05 232 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 POLR3FQ9H1D9 316 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 C19orf81C9J6K1 198 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 OR4C6Q8NH72 309 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TBC1D15Q8TC07 691 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 L1RE1Q9UN81 338 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TKTP29401 623 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 YAP1P46937 504 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 PPARDQ03181 441 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 POU5F1BQ06416 359 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TTLL9Q3SXZ7 439 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF12P17014 697 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ATP4AP20648 1035 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 NAB2Q15742 525 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF473Q8WTR7 871 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 AFG1LQ8WV93 481 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 EEF2KMTQ96G04 330 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 FARSBQ9NSD9 589 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF180Q9UJW8 692 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 PCDHB2Q9Y5E7 798 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 FDFT1P37268 417 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 MAGEA8P43361 318 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 SNRNP48Q6IEG0 339 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TAB3Q8N5C8 712 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 RBM15Q96T37 977 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TMCC3Q9ULS5 477 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 RNFT2Q96EX2 444 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 C15orf41Q9Y2V0 281 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 PDHA2P29803 388 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 TOB2Q14106 344 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 OASLQ15646 514 aaKnown RBP10.01□□□□□ -0.81
COL12A1-201ENST00000322507 CCDC58Q4VC31 144 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 FAM47EQ6ZV65 393 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ULK2Q8IYT8 1036 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 C11orf70Q9BRQ4 267 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 RRN3Q9NYV6 651 aa10.01□□□□□ -0.81
COL12A1-201ENST00000322507 ANXA9O76027 345 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 ALOX12P18054 663 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 EIF3EP60228 445 aaKnown RBP10□□□□□ -0.81
COL12A1-201ENST00000322507 PRKCQQ04759 706 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 C12orf60Q5U649 245 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 TCEAL6Q6IPX3 200 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 PKN3Q6P5Z2 889 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 MB21D2Q8IYB1 491 aaPredicted RBP10□□□□□ -0.81
COL12A1-201ENST00000322507 SSX3Q99909 188 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
COL12A1-201ENST00000322507 GH2P01242 217 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 SPDYE7PQ495Y7 208 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 NAPEPLDQ6IQ20 393 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 EXT2Q93063 718 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 EIF2AK1Q9BQI3 630 aaKnown RBP10□□□□□ -0.81
COL12A1-201ENST00000322507 GIN1Q9NXP7 522 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 GTF3C4Q9UKN8 822 aa10□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF451Q9Y4E5 1061 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms