RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TUBE1Q9UJT0 475 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CYP11B1P15538 503 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 RPA1P27694 616 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PKN2Q16513 984 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PHACTR4Q8IZ21 702 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PMM1Q92871 262 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TP53INP1Q96A56 240 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 MTERF3Q96E29 417 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 YME1L1Q96TA2 773 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CDC42EP4Q9H3Q1 356 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 SH3BP4Q9P0V3 963 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CHKBQ9Y259 395 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PGK1P00558 417 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 DARSP14868 501 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CLK1P49759 484 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TRAF2Q12933 501 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 MTHFD1LQ6UB35 978 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TRMT11Q7Z4G4 463 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 OR6K2Q8NGY2 324 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 C12orf65Q9H3J6 166 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PCDHB2Q9Y5E7 798 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 DLGAP3O95886 979 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 NDST1P52848 882 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CAV1Q03135 178 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 RABL6Q3YEC7 729 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 MTMR8Q96EF0 704 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ERAP1Q9NZ08 941 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TRMT6Q9UJA5 497 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ERCC6L2Q5T890 1561 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CBX6O95503 412 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TMEM253P0C7T8 217 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 BDNFP23560 247 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 SPRP35270 261 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PRIM2P49643 509 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 GEMIN4P57678 1058 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CXCL9Q07325 125 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 SCFD1Q8WVM8 642 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 DNAJC9Q8WXX5 260 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 OMDQ99983 421 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 DMAP1Q9NPF5 467 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ZBTB11O95625 1053 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 FMO4P31512 558 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CAP2P40123 477 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PIGHQ14442 188 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 INPP5AQ14642 412 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ARMC6Q6NXE6 501 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PCDH20Q8N6Y1 951 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PADI4Q9UM07 663 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 CAPN1P07384 714 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 ZFXP17010 805 aaPredicted RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PLD1Q13393 1074 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 FOPNLQ96NB1 174 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CISHQ9NSE2 258 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 GAKO14976 1311 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 ATXN2Q99700 1313 aaKnown RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 GNG14A0A1W2PPG7 69 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 TBC1D4O60343 1298 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 USP17L7P0C7H9 530 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 LSM3P62310 102 aaKnown RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PTPAQ15257 358 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 AGKQ53H12 422 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 FAM124AQ86V42 546 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 APBA2Q99767 749 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 NFKBIZQ9BYH8 718 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PKD2L2Q9NZM6 624 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CYP2F1P24903 491 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 MMRN1Q13201 1228 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 ORC2Q13416 577 aaPredicted RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 UTP15Q8TED0 518 aaKnown RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PAFAH2Q99487 392 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 KDM4CQ9H3R0 1056 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CAB39Q9Y376 341 aaPredicted RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PDS5AQ29RF7 1337 aaKnown RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CLDN5O00501 218 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 UBOX5O94941 541 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 MLNP12872 115 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 INSRRP14616 1297 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 ADIGQ0VDE8 80 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 TOMM20Q15388 145 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CYP51A1Q16850 503 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 OR9Q1Q8NGQ5 310 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 DDX18Q9NVP1 670 aaKnown RBP9.11□□□□□ -0.95
SSBP2-201ENST00000320672 GRK2P25098 689 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 MAXP61244 160 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 RHOAP61586 193 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 PPIL6Q8IXY8 311 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 GRIN3AQ8TCU5 1115 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CDCA5Q96FF9 252 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 NSL1Q96IY1 281 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 NDNQ99608 321 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 ZNF556Q9HAH1 456 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 IL17RBQ9NRM6 502 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 CHST7Q9NS84 486 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 AP4E1Q9UPM8 1137 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 AK5Q9Y6K8 562 aa9.11□□□□□ -0.95
SSBP2-201ENST00000320672 TECPR2O15040 1411 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms